IMGT Web resources: IMGT repertoire

Protein display: Horned shark (Heterodontus francisci) IGH V-REGIONs

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

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      IGHV                      FR1-IMGT           CDR1-IMGT       FR2-IMGT      CDR2-IMGT                  FR3-IMGT                 CDR3-IMGT
      gene                       (1-26)             (27-38)        (39-55)        (56-65)                   (66-104)                 (105-115)
______________________ __________________________ ____________ _________________ __________ _______________________________________ ___________  
                       1       10        20         30         40        50         60         70        80        90        100       110

                       .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|.........|.........|.... .....|.....    

   X13447  ,IGHV1S1    DVVLTQPEA.ETGKPGGSLRLTCKTS GFNLGSYR.... MYWVRQVPGQGLEWIVY YYSSSGN... NYAPEIK.DRFTASKDTSKNIFALDMKKLKTEDTAIYYC ARD
~VDJ X13449,IGHV1S2    DVVLTQPEA.ETRSPGCSLRLTCKTS GFNFGSHT.... MHWVRQVPGQGLEWLVY YYISSNI... HYAPGVK.DRFTASKDTLNNIFALDMKNLKTEDNAIYFC ARD
   Z11777  ,IGHV1S3    DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLGSYY.... MTWVRQVPGQGLEWLVS YHSSSYQ... YYAPEIK.DRFTASKDTSNNIFALDMKSLKTEDTAMYYC ARD
   Z11778  ,IGHV1S4    DVVLTQPEA.DTGKPEGSLRLTCKTS GFSLGSYY.... MTWVRQVPGQGLEWLVS YYTSSYQ... YYAPEIK.DRFTASKDTSNNIFALDMKSLKTEDTAMYYC ARD
#c Z11781  ,IGHV1S5    DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLESYY.... MTWVRQVPGQGLEWLVN YHSSSYQ... YYAPEIK.DRFTASKETSNNIFALDMKSLKTEDTAMYYC VRD
#c Z11782  ,IGHV1S6    DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLGTYY.... MTWVRQVPGQGLEWLVT YHSSSYQ... YYAPEIK.DRFTASKDTSNNIFALDMKSLKTEDTAMYYC AK
#c Z11783  ,IGHV1S7    DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLGNYY.... MTWVRQVPGQGLEWLVS YHSSSYQ... YYAPEIK.DRFTASKDTSNNIFALDMKSLKTEDSAMYYC AS
#c Z11784  ,IGHV1S8    DIVLTQPEA.DTGNPEGSLRLTCKTS GFRLGSYY.... MTWVRQVPGQGLEWLVS YHSSSYQ... YYAPEIK.DRFTASKDTSNNIFALTMKSLKTEDTAMYYC AR
#c Z11785  ,IGHV1S9    DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLGSYY.... MTWVRQVPGQGLEWLVR FHSSSYQ... YYAPERK.DRFTASKDTSNNIFALDMRSLKTEDTGMYYC AR
#c Z11786  ,IGHV1S10   DIVLTQPEA.DTGKPEGSLRLTCKTS GFSLGNYY.... MTWVRQVPGQGLEWLVS YHSSSYH... YYAPEIK.DRFTASKDTSNNIFALEMKSLKTEDTSMYFC AR
#c Z11787  ,IGHV1S11   DVVLTQPES.DTGKPEGSLRLTCKTS GFSLGNYY.... MTWVRQVPGQGLEWLVS YYTSSYQ... YYAPEIK.DRFTASKDTSNKIFTLDMKSLKTEDTAIYYC AK
#c Z11788  ,IGHV1S12   NVVLTQPEA.DTGKPEGSLRLTCKTS GFNLGRYY.... MTWVRQVPGQGLEWLVS YYTSSYQ... YYVPEIK.DRFTASKDTSNNIFALDMKSLKTEDTAMYYC AR
#c Z11789  ,IGHV1S13   DVVLTQPEA.DTGKPKGSLRLTCKTS GFSLGSYY.... MTWVRQGPGQGLEWLVS YHSSSYQ... YYAPEIK.DRFTASKDTSNNIFALDMKSLKTEDTAMYYC AR
~VD X13448 ,IGHV1S14   DVVLTQPEA.ETGKPGGSLRLTCKTS GFNLGNTR.... MYWIRQVPGQGLEWLVH YDASSSN... SYAPEIK.DRFTASKDTSNNIFALAMKNLKTEGTAIYYC ARN
   Z11776  ,IGHV1S15   DIVLTQSAS.VTKKPGESHKLSCSVS GFSLDSYY.... VHWVKQAPGKGLEWLLA YRKPSDTI.. YYAPGVQ.GRIIPSR..ASSTTYIEIKSLRSEDTAMYYC ARD
#c Z11791  ,IGHV1S16   DIVLTQSAS.VTKKPGESHKLSCSVS GFSLDNYY.... VHWVKQAPGKGLEWLLA YRKPSDTI.. YYAPGVQ.GRIIPSR..ASSTTYIEIKSLRSEDTAMYYC AE
#c Z11792  ,IGHV1S17   DIVLTQSTS.VTKKPGESHKISCSVS GFSLDNYY.... VHWVKQAPGKGLEWLLA YRKPSDTI.. YYAPGVQ.GRIIPSR..ASSTTYIEIKSLRSEDTAMYYC AR

#c: rearranged cDNA
~VD: VD genomic DNA rearranged in the cassette
~VDJ: VDJ genomic DNA rearranged in the cassette

Created: 06/07/2000
Last updated: Monday, 11-Jul-2011 12:56:55 CEST
Authors: Lorena Betancourt and Dominique Scaviner
Contact: Marie-Paule Lefranc

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