Protein display: Little skate (Raja erinacea) IGH V-REGIONs

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

_________________________________________________________________________________________________________________________________________________
      IGHV                        FR1-IMGT            CDR1-IMGT      FR2-IMGT      CDR2-IMGT                  FR3-IMGT                 CDR3-IMGT
      gene                         (1-26)              (27-38)        (39-55)       (56-65)                   (66-104)                 (105-115)
______________________   __________________________ ____________ _________________ __________ _______________________________________ ___________  
                         1       10        20         30         40        50         60         70        80        90        100       110
                         .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|.........|.........|.... .....|.....    

#c M29672  ,IGHV1S1      AVVLNQKPT.EAAKSGESLKLTCVTS GFSLSSSN.... VHWVKQVPGKGLEWVAI MWYDDDK... DYAPAFS.GRFTVSR..DSSNVYLQMTNLSLADTATYYC A
#c M29679  ,IGHV1S2      DIVLTQPET.ETATPGGSITLNCKIS GFTVGSQW.... MALVRQVPGQGLEWLLH YHSPGNE... QFAPGIK.SRFTPSNDKTNNIFIVTASSLKIEDTAVYYC AR
   X15124  ,IGHV1S3      DIVLTQPKT.EAATPGGSITLTCKVS GFALSSYA.... MHLVRQAPGQGLEWLLR YFSSSNK... QFAPGIE.SRFTPSTDHSTNIFTVIARNLKIEDTAVYYC AR
~VD X15125 ,IGHV1S4      EIVLTQPKT.GTAVPGGSITLTCKTS GFTLSSYY.... IYLVRQVPGQGLEWLLT YHASATN... YFAPGIE.SRFTPSTDNSNNMFTVIARNLKIEDTAVYYC A
~VD,DJ X16146,IGHV1S5    DVVLTQPKT.GTAVPGGSITLTCKTS GFTLSSYY.... MYLIRQVPGQGLEWLLA YHAPTTTV.. YFAPGIE.SRFTPSKDNSNNMFTVIARNLKIEDTDVYYC AR 


#c: rearranged cDNA
~VD,DJ: VD,DJ genomic DNA rearranged in the cassette.
~VD: VD genomic DNA rearranged in the cassette.


Created: 17/05/2001
Last updated:Monday, 11-Jul-2011 12:57:01 CEST
Authors: Lorena Betancourt and Dominique Scaviner
Contact: Marie-Paule Lefranc

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