IMGT Repertoire (IG and TR)

Protein display: Rainbow trout (Oncorhynchus mykiss) IGH J-REGIONs

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

Only the *01 allele of each functional, ORF and in-frame pseudogenes J-REGION is shown.

                                       J-REGION
                                 1        10        
                                 |........|.......
AY872256,  IGHJ1*01   ,   F      ..AFDYWGKGTQVTVSA
AY872256,  IGHJ2*01   ,   F      YGYFDYWGKGTLITVSS
AY872256,  IGHJ3*01   ,   F      .YYFDYWGKGTQVTITS
AY872256,  IGHJ4*01   ,   F      .NYFDYWGKGTMVTVST
AY872256,  IGHJ5*01   ,   F      .NAFDYWGKGTMVTVS.
AY872256,  IGHJ6*01   ,   F      .YRFDYWGKGTMVTVSS
AY872256,  IGHJ7*01   ,   F      YAAFDSWGQGTIVTVS.

Created: 15/12/2009
Author: Amandine Lacan
Contact: Marie-Paule Lefranc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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