Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).
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TRAV FR1-IMGT CDR1-IMGT FR2-IMGT CDR2-IMGT FR3-IMGT CDR3-IMGT
gene (1-26) (27-38) (39-55) (56-65) (66-104) (105-115)
___________________________ __________________________ ____________ _________________ __________ __________________________________________ ___________
1 10 20 30 40 50 60 70 80 84ABC 90 100 110
.........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|............|.........|.... .....|.....
#c AF318539,TRAV1S1 GDSVNQTEGPVTVSEWALMTLNCTYQ TANPAPY..... LFWYIQHLNKSPRLLLK GSISDP.... KPKSE.......GFQATLVQSDRSFHLQKRAVQASDSAVYYC ALS
#c AF318517,TRAV1S2 GDSVTQTEGPVTVSEGALMTLNCTYQ TAGFAPY..... HVWYIQHLNKAPQLLLK GSMSDP.... KPKSE.......GFQATLVQSDRSFHLQKRAVQASDSAVYYC ALK
#c AF318520,TRAV1S3 GDSVNQTEGPVTVSEGALMTLNCTYQ TAVFSPY..... LFWYIQHLNKAPRLLLK GSMSDP.... KPKTE.......GFQATLVQSDRSFHLQKWAAQASDLAVYYC ALS
#c AF318532,TRAV1S4 GDSVNQTEGPVTVSEGALMTLNCTYQ TAGLTPY..... LYWYVQHLNKAPRLLLK GSARDP.... KPKSE.......GFQATLVQSDRSFHLQKRAVQASDSAVYYC ARG
#c AF318545,TRAV1S5 GDSVNQTEGPVTVSEGALMTLNCTYQ TADFSPY..... LYWYIQHLNKAPQLLLK GSARDL.... KPKSE.......GFQATLVKSDSSFHLQKRAVQASDSAVYXC ALN
#c AF318535,TRAV1S6 GDSVNQTEGPVTVSEGALMTLNCTYQ ATYSTVY..... LFWYVQHLNKAPQVLLK GLTADK.... KVEHE.......GFQATLVKSDRSFHLQKRAVQASDSAVYYC ALS
#c AF318530,TRAV1S7 GDSVTQTEGPVTVSEGALMTLNCTYR ATYSNVY..... LFWYVQHLNKAPQLLLK GLTADK.... KVEHE.......GFQATLVQSDRSFHLQKRAVQASDSAVYYC ALS
#c AF318510,TRAV2S1 DAKTTQ.PNSMDCAEGEDVNLPCNHS TISGDDY..... IHWYRQNPNQSPQYVIH GLRG...... TVNGS.......MASLTIASDRKSSTLVLTQVTLRDAAVYYC ALRE
#c AF318540,TRAV2S2 DAKTTQ.PNSMDCAEGEDVNLPCNHS TVSGDDY..... IHWYRQNPNQSPQYVIH GLRG...... TVNGS.......MASLTIASDRKSSTLVLPQVTLRDAAVYYC A
#c AF318521,TRAV2S3 DSKTTQ.PMSVEGTEEEPVHLTCNHS TISGSEY..... VYWYRQIPRQGPEYLIH GLNN...... NVTNR.......MASLSIAKDRKSSTLVLPQVTLRDTAVYYC ILRD
#c AF318526,TRAV3S1 LAKTSQ.PIIIDSYEGQEVNIPCNHT TIAISEY..... IFWYRQFPNQGPQFIIQ GYTT...... TVENE.......VASLLIPPDRKLSTLSLPRASLGDAAVYYC
#c AF318518,TRAV4S1 KEQVFQ.PSTVVSLEGAVAEVSCNHS ISSDYG...... FFWYLHFPGFAPRLLIE GLR....... PSQQG.......RYNMTYER..FSSSLLILQVQTADAGVYYC AVDP
#c AF318544,TRAV4S2 KEQVFQ.PSTVVSLEGAVAEISCNHS ISSDYG...... FFWYLHFPGFAPRLLIE GLR....... PSQQG.......RYNMTYER..FSSSLLILQVQTADAGVYYC AVS
#c AF318519,TRAV5S1 GNKVEQSPSTLSVQEGNSSVITCTYT DGNSEY...... FPWYKQEPGKGPQLLIA IRSNKD.... KEEDQ.......KLTVFLNKTAKRLSLHIATTEAGDSAAYFC AAR
#c AF318538,TRAV5S2 GNKVEQSPSTLSVQQGNNCFINCTYT DVTTSY...... FPWYKQEPGKGPQLLID ISSNMG.... KNEGQ.......RLTVLLNKTTKHLSLHITTTEPGDSAVYFC AAS
#c AF318509,TRAV5S3 GNKVEQSPSTLSVQEGNGSVITCTYT DTASDY...... FPWYKQEPGKGPQLLIA IRSNMG.... EKKDQ.......RLTVLLNKTAKHLSLHIATIQSGDSAVYFC AED
#c AF318514,TRAV5S4 GNKVEQSPSTLSVQEGNSSVITCTYT DTASDY...... FPWYKQEPGKGPQLLIA IRSNMG.... EKKDQ.......RLTVLLNKTAKHLSLHIATIQPGDSAVYFC AAS
#c AF318527,TRAV6S1 AQKVAQNRSEISVLEKEDVTLNCAYE ANSYTYY..... LFWYKQPPSGEMIFLIH QESYNEL... NTTKG.......QYFLNFQKATSSISLTITDLQLEDSAVYFC ALRDR
#c AF318534,TRAV6S2 AQKVTQNRSEISVLEKEDVTLNCAYE ANSYTYY..... LFWYKQPPSGEMIFLIH QESYNEL... NTTKG.......QYFLNFQKATSSISLTITDLQLEDSAVYFC ALRT
#c AF318528,TRAV7S1 AQKVTQDQPPISVQEKETVTLDCTYD ISIATYS..... LFWYKQPSSGVMTFLIR QDSSNKA... NATEG.......RYSLNFQKASKFITLTISASQLEDSAVYFC AL
#c AF318531,TRAV8S1 ADKVTQAQTTVTGQEGEAATIGCTYE TSRTYYT..... LFWYRQFPGGRMEFLIY QDSNQA.... NARRD.......RYSVNFQKGKKTISLTISSLHLADSAKYFC ALW
#c AF318537,TRAV8S2 AQKVTQDQSDVSSQVGQSVTLNCRYE TSWGAYY..... LFWYKQLPSGQMTYLIQ QYSGYS.... NARNG.......RYSVNFQRADKSISLIISSLQLEDSAKYFC AWC
#c AF318515,TRAV9S1 QNTVEQSPASLPVPEGAVASLGCTYS DSASQY...... FTWYRQYPGKGPEFLLL VYSAK..... DKEEG.......KFTAQSNKSNKHVSLHIRDSEPGDSATYLC AVS
#c AF318543,TRAV10S1 QEQVKQSPQPLTVQEGEISILNCSYE KSAFDY...... FPWYRQYPGKGPALLIA IRSVVN.... EMKDG.......RLTVFLNKSAKQLSLHITTSQPGDSATYFC AAS
#c AF318529,TRAV10S2 QEQVKQSPQPLTVQEGEISILNCSYE RSAFDY...... FPWYRQYPGKGPALLIA IRSVVN.... EMKDG.......RLTVFLNKSAKQLSLHITTSQPGDSATYFC AA
#c AF318524,TRAV11S1 QQKVKQNPPSLSMTEGGISILNCDYD DIMFNY...... FQWYRNYPAKSPTFLIS IGSVLE.... KNEDG.......RFTVFHNRSAKHLSLHISASQPGDSALYLC AAV
#c AF318547,TRAV12S1 DDYVMQSPSSLIVLEGSNATLSCSYK VTNVQS...... LHWYKQEEKVPTFLFAL ISTGI..... EKTSG.......RLRGTLDRKELLSTLHITVTKPGDSATYLC AVM
#c AF318513,TRAV13S1 KQDVSQSPEALSVREGDSLVLNSSYT DGALYF...... LQWLRQDPRKGLTSLLS IQANQK.... EKASG.......RITVSLDKSSRHSALYIATSQHSDSTTYLC A
#c AF318546,TRAV14S1 TQQLEQNPKFLRIQEGGNVTVYCNSS STFTF....... FQWYRQKPEEGPVLLVT LTKPKE.... VKEQK.......RIRAEFGEARKDSSLLITAAQPGDAGTYLC AG
#c AF318523,TRAV15S1 GQQIKHFPEFLLLQEGENFTTYCNSS SLLSS....... LQWYKQRPGGSPVFLMI LTKSGE.... VKTQQ.......RWTGRFGESRQHSSLHLTAAQLSDAGTYFC AG
#c AF318522,TRAV16S1 GVKVEQRPSILSLQEGANSTLWCNSS DTVNS....... VQWFQQNPGGSLITLFF IASG...... MKQNE.......RLSSTVNSKERYSTLHITASQLEDSATYLC AVE
#c AF318533,TRAV16S2 GVKVEQSPSVLSLQEGANSTLWCNFS DTVNS....... VQWFQQNPGGSLTRLFF IASG...... TKQNE.......RLSSTVNSKEQYSTLHITASQLEDAATYLC AAR
#c AF318541,TRAV16S3 GVKVEQRPSILSLQEGANSTLWCNSS DTVNS....... VQWFQQNPGGSLARLFF IASG...... MKQNE.......RLSSTVNSKERYSTLHITASQLEDSATYLC AVV
#c AF318542,TRAV17S1 GVDVEQSPPALSLQQGASYTLQCNFS TSPQS....... VNWYLQNPGGHLIQLFY IPSG...... TKQDG.......RLKATTVPAERRSSLHISSSQTTDSGTYFC AAN
#c AF318516,TRAV17S3 GLDVEQSPPALSLQEGASHMLRCNFS GSVSS....... VQWYLQNPSGRLIHLFN VPSG...... TKQDG.......RLKATTIPTERSSSLHVSSSQTTDSGTYFC AAR
#c AF318536,TRAV17S4 GVDAEQSPPALTPQEGASSTLWCNFS TLADI....... VRWYLQKPGGRLIHLIY IPSG...... TRQEG.......RLNATAVPKERRSSLHISSLRTTDSGAYFC AVL
#c AF318512,TRAV18S1 QTKVEQSPGVLTLQEGRNSSLICNYS ISTRS....... VQWFQQNPDGRLISLFY IASG...... MQQKG.......RLKSTINSKESYSQLYIRDSQPGDSATYFC AVV
#c AF318511,TRAV19S1 GQSVTQPDDPVLVSEGTSLELKCNYS YGATPY...... LFWYVQYPGQRPQLLLK YFSGNTV... VQGTR.......GFLAEFKSSDFSFNLRKFSAHWSDSAEYFC AVT
#c: rearranged cDNA.
Created: 26/09/2002
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics
information system® http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37:
D1006-D1012; doi:10.1093/nar/gkn838
Full text.
Author: Géraldine Folch
Contact: Marie-Paule Lefranc
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr Computer manager: Patrice Duroux Patrice.Duroux@igh.cnrs.fr Webmaster: Chantal Ginestoux Chantal.Ginestoux@igh.cnrs.fr |
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