IMGT Repertoire (IG and TR)

Protein display: Mouse (Mus musculus, Mus spretus, Mus cookii, Mus pahari, Mus minutoides, Mus saxicola) IGK C-REGIONs

The IGKC protein display numbering is according to the IMGT unique numbering for C-DOMAIN and C-LIKE-DOMAIN.

Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.

Only the *01 allele of each functional, ORF and in-frame pseudogenes C-REGION is shown.

Letters in red correspond to amino acids which are polymorphic in the other alleles.
For C-REGIONs, letters in bold correspond to additional positions in the IMGT unique numbering.
For C-REGIONs, letters between parentheses correspond to amino acids resulting from the splicing.

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).



Species	IGKC genes	AccNum		A AB B BC C CD D DE E EF F FG G
				(1-15) (16-26) (27-38) (39-45) (77-84) (85-96) (97-104) (105-117) (118-128)
				——————————————> ——————————> ——————> ———————> ———————————> ———————> ——————————>
				1 10 15 16 23 26 27 38 3941 45 77 80 84 85 89 96 97 104 105 117 118 128
				87654321\|........\|....\|123\|......\|..\| \|........\| \|.\|...\|1234567\|..\|...\|12345677654321\|...\|......\|12\|......\| \|...........\| \|.........\|

Musmus	IGKC	V00807	F	RADAAPTVSIFPPSSEQLT...SGGASVVCFLN NFYP..KDIN VKWKIDGSERQN..GVLNSWTDQDSKD.....STYSMSSTLTLTKDEY..ERHNSYTC EATHKT..STSPI VKSFNRNEC
Musspr	IGKC	M21796	F	XADAAPTVSIFPPSSEQLT...SGGASVVCFLN NFYP..RDIN VKWKIDGSERQN..GVLNSWTDQDSKD.....STYSMSSTLTLTKDEY..ERHNSYTC EATHKT..STSPI VKSFNRNEC
Muscoo	IGKC	M21795	F	XADVAPTVSIFPPSSEQLT...SGGASVVCFMN NFYP..RDIN VKWKIDGSERQG..GVLNSWTDQDSKD.....STYSMSSTLTLTKAEY..EQHNSYTC EATHRT..SASPI VKSFNRNEC
Musmin	IGKC	M21794	F	XSDVAPTASIFPPSSEQLA...SGGASVVCFMN NFYP..RDIN VKWKIDGNERRD..GILTSYTDQDSKD.....STYSLSSTLTLTKDEY..ERHNSYTC EATHKT..STSPI VKSFNRNEC
Muspah	IGKC	M21793	F	XADVAPTASIFPPSNEQLA...SGGASIVCFLN NFYP..RDIN VKWKVDGSEKQD..GVLNSWTEQDSKD.....STYSMSSTLTLTKAEY..EQHNSYTC EAVHKT..SSSPI VKSFNRNEC
Mussax	IGKC	M21792	F	XADVAPTASIFPPSSEQLA...SGGASVVCFMN NFYP..KDIS VKWKVDGSERQD..GFLNSWTEQDSKD.....STYSMSSTLTLTKDEY..ERHNSYTC EATHKT..SSSPI VKSFNRNEC

Muscoo:	Mus cookii (Cook's mouse)
Musmin:	Mus minutoides (Pygmy mouse)
Musmus:	Mus musculus (house mouse)
Muspah:	Mus pahari (Shrew mouse)
Mussax:	Mus saxicola (Spiny mouse)
Musspr:	Mus spretus (Western wild mouse)

Created: 23/09/2002
Last updated: Thursday, 15-Sep-2011 11:04:03 CEST
Author: Delphine Guiraudou et Fatena Bellahcene
Editor: Chantal Ginestoux
Contact: Marie-Paule Lefranc

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