IMGT Web resources: IMGT repertoire

Protein display: Mouse (Mus musculus, Mus spretus) IGL V-REGIONs

The IGLV protein display numbering is according to the IMGT unique numbering for V-REGION.

Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.

Letters in red correspond to amino acids which are polymorphic in the other alleles.
For C-REGIONs, letters in bold correspond to additional positions in the IMGT unique numbering.
For C-REGIONs, letters between parentheses correspond to amino acids resulting from the splicing.

house mouse (Mus musculus) IGLV

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IGLV FR1-IMGT CDR1-IMGT FR2-IMGT CDR2-IMGT FR3-IMGT CDR3-IMGT gene (1-26) (27-38) (39-55) (56-65) (66-104) (105-115) __________________________ __________________________ ____________ _________________ __________ _______________________________________ _____________ 1 10 20 30 40 50 60 70 80 90 100 110 .........|.........|...... ...|........ .|.........|..... ....|..... ....|.........|.........|.........|.... .....|...... J00590 ,IGLV1 QAVVTQESA.LTTSPGETVTLTCRSS TGAVTTSNY... ANWVQEKPDHLFTGLIG GTN....... NRAPGVP.ARFSGSL..IGDKAALTITGAQTEDEAIYFC ALWYSNHF.... J00599 ,IGLV2 QAVVTQESA.LTTSPGGTVILTCRSS TGAVTTSNY... ANWVQEKPDHLFTGLIG GTS....... NRAPGVP.VRFSGSL..IGDKAALTITGAQTEDDAMYFC ALWYSTHF.... M34597 ,IGLV3(1) QLVLTQSSS.ASFSLGASAKLTCTLS SQHSTYT..... IEWYQQQPLKPPKYVME LKKDGSH... STGDGIP.DRFSGSS..SGADRYLSISNIQPEDEAIYIC GVDTIKEQFV*. ° AF357985,IGLV4 TQPSS.VSTSLGSTVKLSCKRS TGNIGNNY.... VHWYQQYMGRSPTNMIY DDN....... KRPSGVS.DRFSGSIDSSSNSAFLTINNVQAED ° AF357981,IGLV5 TQPSS.VSTSLGSTVKLSCKRS TGNIGNNY.... VNWYQQYMGRSPTNMIY GDD....... QRPTGVS.DRFSGSIDSSSNSAFLTINNVQAED ° AF357979,IGLV6 TQPSS.VSTSLGSTVKLPCKCS TGNIGSYY.... VHWYQQHMGRSPTNMIH SDD....... QRPSGVS.DRFSGSIDSSSNSAFLTINNVQAED ° AF357980,IGLV7 TQPSS.VSTSLGSTVKLSCKPS TGKIGNYF.... MSWYQQHMGRSPTNMIY RDD....... LRPSGVS.DRFSGSIDSSSNSAFLTINNVQAED ° AF357982,IGLV8 TQPSS.VSTSLGSTVKLPCKRS TGNIGNDY.... VHWYQQHMGRSPTNMIY RDD....... QRPSGVS.DRFSGSIDSSSNSAFLTINNVQAED

°: genomic DNA, but not known as being germline or rearranged.

Algerian mouse (Mus spretus) IGLV

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°: genomic DNA, but not known as being germline or rearranged.

(1) The last codon of the CDR3-IMGT is a STOP-CODON which can disappear during rearrangements.

Created: 11/06/1998
Last updated: Thursday, 15-Sep-2011 11:04:03 CEST
Authors: Dominique Scaviner and Delphine Guiraudou
Contact: Marie-Paule Lefranc

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