Only the *01 allele of each functional, ORF and in-frame pseudogene J-REGION is shown.
Letters in red correspond to amino acids which are polymorphic in the other alleles.
For C-REGIONs, letters in bold correspond to additional positions in the IMGT unique numbering.
For C-REGIONs, letters between parentheses correspond to amino acids resulting from the splicing.
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TRAJ
genes
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1 10 20
.........|.........|...
M64239,TRAJ59 .LLKREDKATFATGGYEAEED..
M64239,TRAJ58 .QQGTGSKLSFGKGAKLTVSP..
M64239,TRAJ57 .NQGGSAKLIFGEGTKLTVSS..
M64239,TRAJ56 .ATGGNNKLTFGQGTVLSVIP..
M64239,TRAJ53 NSGGSNYKLTFGKGTLLTVTP..
M64239,TRAJ52 NTGANTGKLTFGHGTILRVHP..
M64239,TRAJ50 .ASSSFSKLVFGQGTSLSVVP..
M94081,TRAJ49 ..NTGYQNFYFGKGTSLTVIP..
M64239,TRAJ48 .ANYGNEKITFGAGTKLTIKP..
M64239,TRAJ47 ...HYANKMICGLGTILRVRP..
M64239,TRAJ46 .RRQQCRHAGFGDGDELGVST..
X02859,TRAJ45 .NTEGADRLTFGKGTQLIIQP..
M64239,TRAJ44 .VTGSGGKLTLGAGTRLQVNL..
M64239,TRAJ43 ...NNNNAPRFGAGTKLSVKP..
M64239,TRAJ42 NSGGSNAKLTFGKGTKLSVKS..
M64239,TRAJ41 ...VSNTSSMLAEAPHYWSHP..
X03058,TRAJ40 .VNTGNYKYVFGAGTRLKVIA..
M64239,TRAJ39 .NNNAGAKLTFGGGTRLTVRP..
M64239,TRAJ38 .NVGDNSKLIWGLGTSLVVNP..
M64239,TRAJ37 ..TGNTGKLIFGLGTTLQVQP..
X03056,TRAJ35 .QTGFASALTFGSGTKVIPCLP.
X02862,TRAJ34 ..SSNTDKVVFGTGTRLQVSP..
M64239,TRAJ33 ...DSNYQLIWGSGTKLIIKP..
X02858,TRAJ32 NYGSSGNKLIFGIGTLLSVKP..
M64239,TRAJ31 ...NSNNRIFFGDGTQLVVKP..
M64239,TRAJ30 ..DTNAYKVIFGKGTHLHVLP..
M64239,TRAJ29 ..NSGSRELVLGREARLSMIE..
X17177,TRAJ28 LPGTGSNRLTFGKGTKFSLIP..
M64239,TRAJ27 ..NTNTGKLTFGDGTVLTVKP..
M64239,TRAJ26(1) ..NNYAQGLTFGLGTRVSVFP..
M64239,TRAJ25 ...RTKVSSVFGTWRRLLVKP..
M64239,TRAJ24 .ELASLGKLQFGTGTQVVVTP..
M64239,TRAJ23 ..NYNQGKLIFGQGTKLSIKP..
M64239,TRAJ22 ..SSGSWQLIFGSGTQLTVMP..
M64239,TRAJ21 ...SNYNVLYFGSGTKLTVEP..
M64239,TRAJ20 ...SGNYKLGVESVTMMSVRA..
M64239,TRAJ19 .IYRGFHKFSSGIESKHNVSP..
M64239,TRAJ18 DRGSALGRLHFGAGTQLIVIP..
M64239,TRAJ17 .TNSAGNKLTFGIGTRVLVRP..
X03057,TRAJ16 .ATSSGQKLVFGQGTILKVYL..
M64239,TRAJ15 ..YQGGRALIFGTGTTVSVSP..
M64239,TRAJ13 ...NSGTYQRFGTGTKLQVVP..
M64239,TRAJ12 ..GTGGYKVVFGSGTRLLVSP..
M64239,TRAJ11 ..DSGYNKLTFGKGTVLLVSP..
X03761,TRAJ9 ..RNMGYKLTFGTGTSLLVDP..
M64239,TRAJ7 ..DYSNNRLTLGKGTQVVVLP..
M64239,TRAJ6 .TSGGNYKPTFGKGTSLVVHP..
M38105,TRAJ5 .GTQVVGQLTFGRGTRLQVYA..
M64239,TRAJ4 .LSGSFNKLTFGAGTRLLCAH..
M64239,TRAJ3 .EFSYSSKLIFGAETKLRNPPY.
M64239,TRAJ2 NTGGLSGKLTFGEGTQVTVIS..
(1)The deletion of c26 in both of M64239 and AE008686, for the TRAJ26 J-REGION is probably due to a sequencing error. The functionality of TRAJ26 has been changed (on 19/01/2007) from pseudogene (due to a frameshift) to functional.
Created: 11/06/1998
Last updated: Wednesday, 29-Jun-2011 17:06:07 CEST
Authors: Dominique Scaviner and Joumana Jabado Michaloud
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001); Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003); Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5, 45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text; Lefranc, M.-P. et al., Nucleic Acids Research 2009 37: D1006-D1012; doi:10.1093/nar/gkn838 Full text.
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IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
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