IMGT Repertoire (IG and TR)
Protein display: Rabbit (Oryctolagus cuniculus) IGK V-REGIONs
Dots indicate gaps according to the IMGT unique numbering. Blanks at the 5' and/or 3' end indicate partial sequences.
Only the *01 allele of each functional, ORF and in-frame pseudogene V-REGION is shown.N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CH-S and in pages edited before 14/10/2009).
FR1-IMGT CDR1-IMGT FR2-IMGT CDR2-IMGT FR3-IMGT CDR3-IMGT | |||||
(1-26) (27-38) (39-55) (56-65) (66-104) (105-117) | |||||
| AccNum | Gene name | Fct | A B BC C C' C'C" C" D E F FG | ||
(1-15) (16-26) (27-38) (39-46) (47-55) (56-65) (66-74) (75-84) (85-96) (97-104) (105-117) | |||||
——————————————> ——————————> ———————> ————————> ————————> —————————> ———————————> ———————> | |||||
1 10 15 16 23 26 27 38 3941 46 47 55 56 65 66 74 75 80 84 85 89 96 97 104 105 11112 117 | |||||
|........|....| |......|..| |..........| |.|....| |.......| |........| |.......| |....|...| |...|......| |......| |.....||....| | |||||
| K02131 | IGKV1S1 | F | (1) | ALVMTQTPSPVSAAV GGTVTISCQSS ESVY....SNNR LSWFQQKP GQPPKLLIY TA.......S SLASGVP.S RFKGSG..SG TQFTLTISGVEC DDAATYYC AGYKSYSK**Y | |
| K02438 | IGKV1S2 | F | AQVLTQTESPVSAPV GGTVTINCQAS QSVY....DNNY LSWYQQKP GQPPKLLIY DA.......S KLASGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QGSYYSSGWY | ||
| K02439 | IGKV1S3 | F | AQVMTQTPASVSAAV GGTVTIICQAS ESI......SSY LNWYQQKL GQPPKLLIY YA.......S TLASGVP.S RFKGSG..SG TEYTLTISGVQC DDAATYYC QHGYIYSSGD | ||
| K02440 | IGKV1S4 | ORF | (2) | AIDMTQTPASVEAAV GGTITINCQAS ESI......SSW LAWYQQKP GQPPKLLIY EA.......S KLASGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QGGYYNSGWY | |
| X00977 | IGKV1S5 | F | DPVMTQTPSSTSAAV GGTVTINCQSS QNVY....SNNY LSWFQQKP GQPPKLLIY GA.......S KLASGVP.S RFSGSG..SG KQFTLTISGVQC DDAATYYC AGYYYSGSGTD | ||
| X14364 | IGKV1S6 | F | DGVMTQTPAPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFNGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | ||
| AF135645 | IGKV1S7 | F | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | ||
| AF135646 | IGKV1S8 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC QCTYSSSTG | ||
| AF135647 | IGKV1S9 | F | AAVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | ||
| AF135648 | IGKV1S10 | F | DVVMTQTPSSKSAAV GDTVTIKCQAS QSI......NSY LSWYQQKP GQPPKLLIY RA.......S TLESGVP.S RFKGSG..SG TQFTLTISDLEC ADAATYYC QSNYYSSSNG | ||
| AF135649 | IGKV1S11 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | ||
| AF135650 | IGKV1S12 | F | DPVLTQTASPVSAAV GGTVTISCQSS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QGAYSGNIY | ||
| AF135651 | IGKV1S13 | P | ALVMTQTPSPVSAAV GSTVTISCQSS QSVY.....SNY LSWFQ*KP GQPPKLLIY RA.......S NLETGVP.S RFKGSG..FG TQFTLTISGAQC DDAATYYC AGYKNYSNDD | ||
| AF135652 | IGKV1S14 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QGAYSGNIY | ||
| AF135653 | IGKV1S15 | F | AQGPTQTPSSVSAAV GGTVTINCQTS ESFY....SNNI LSWYQQKP GQPPKLLIY DA.......S TLASGVP.S RFKGSG..SG TQFTLTISDVQC DDAATYYC QGSYHSSGWY | ||
| AF135654 | IGKV1S16 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | ||
| AF135655 | IGKV1S17 | F | ALVMTQTPASVEAAV GGTVTIKCQAS QSI......SNL LAWYQQKP GQPPKLLIY YA.......S DLASGVS.S RFKGSG..SG TEYTLTISGVQC ADAATYYC QGYYYSSSAD | ||
| AF135656 | IGKV1S18 | F | AAVMTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | ||
| AF135657 | IGKV1S19 | F | AAVLTQTPSPVSAAV GGTVTIKCQSS QSVY....NNNL LSWYQQKP GQPPKLLIY DA.......S NLASGVP.D RFSGSG..SG TQFTLTISGVQC DDAATYYC LGGYDDDAD | ||
| AF135658 | IGKV1S20 | F | DPMLTQTASPVSAAV GSTVTISCQSS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QGAYSGNIY | ||
| AF135659 | IGKV1S21 | F | YVMMTQTPSSVSEAV GGTVTIYCQAS QSV......SNL LAWYQQKP GQPPKLLIY GA.......S NLESGVP.S RFRGSG..SG TQFTLTISGMKA EDVATYYC HQHSSYP | ||
| AF135660 | IGKV1S22 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | ||
| AF135661 | IGKV1S23 | F | DVVMTQTPSPVSAAV GGTVTINCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | ||
| AF135662 | IGKV1S24 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC QGAYSGNIY | ||
| AF135663 | IGKV1S25 | F | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QGAYSGNIY | ||
| AF135619 | IGKV1S26 | F | DPMLTQTASPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | ||
| ° | AF135601 | IGKV1S27 | [F] | YVMMTQTPSSVSEAV GGTVTIYCQAS QSV......SNL LAWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TEYTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135602 | IGKV1S28 | [F] | DPMLTQTASPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135603 | IGKV1S29 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135604 | IGKV1S30 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC QSNYYSSSSNYG | |
| ° | AF135605 | IGKV1S31 | [F] | DIVLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNI | |
| ° | AF135606 | IGKV1S32 | [F] | AVVLTQTASPVSAAV GGTVTINCQAS QSI......STA LAWYQQKP GQRPKLLIY DA.......S KLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QQGYSSSSAD | |
| ° | AF135607 | IGKV1S33 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135608 | IGKV1S34 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TEFTLTISDLEC ADAATYYC QSYYGSSSTG | |
| ° | AF135609 | IGKV1S35 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFRGSG..SG TQFTLTISGMKA EDVATYYC HQHSSYP | |
| ° | AF135610 | IGKV1S36 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSR..SG TEFTLTISDLEC ADAATYYC QCTYSSSTG | |
| ° | AF135611 | IGKV1S37 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY RA.......S TLESGVP.S RFKGSG..SG TQFTLTISDLEC ADAATYYC QHGYIYSSGD | |
| ° | AF135613 | IGKV1S39 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QGSYSGATY | |
| ° | AF135614 | IGKV1S40 | [F] | DPVLTQTASPVSAAV GGTVTISCQSS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135615 | IGKV1S41 | [F] | AAVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSCSSADC | |
| ° | AF135616 | IGKV1S42 | [F] | DPMLTQTPSPVSAAV GGTVTINCQAS QSI......SNE LSWYQQKP GQPPKLLIY LA.......S TLASGVP.P RFKGSG..SG TEFTLTISDLEC ADAATYYC QNYYGSSAGA | |
| ° | AF135618 | IGKV1S44 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS ENI......YSG LAWYQQKP GQPPKLLIY AA.......S NLETGVP.S RFSGSG..SG TEYTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135620 | IGKV1S45 | [F] | AAVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQP GDAATYYC LDDIDTP | |
| ° | AF135621 | IGKV1S46 | [F] | DPVLTQTASPVSAAV GGTVTISCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135622 | IGKV1S47 | [F] | AIKMTQTPSSVSAAV GGTVTINCQAS EDI......ESF LAWYQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135623 | IGKV1S48 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC AARYSGNIY | |
| ° | AF135624 | IGKV1S49 | [F] | DPVLTQTPSSACEPV GGTVTIKCQAS ESI......SSR LAWYQQKP GQSPKLLIY SA.......S TLASGVP.S RFKGSG..SG TEYTLTISDLEC ADAATYYC QNNNGGSGSTG | |
| ° | AF135625 | IGKV1S50 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135626 | IGKV1S51 | [F] | YVMMTQTPSSVSEAV GGTVTIYCQAS QSV......SNL LAWYQQKP GQPPKLLIY GA.......S NLESGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135627 | IGKV1S52 | [F] | DPMLTQTASPVSAAV GGTVTISCQSS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135628 | IGKV1S53 | [F] | YVMMTQTPSSVSEAV GGTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135629 | IGKV1S54 | [F] | DVVMTQTPSPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135630 | IGKV1S55 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC QCTYSSSTG | |
| ° | AF135631 | IGKV1S56 | [F] | DPVLTQTASPVSAAV GGTVTISCQSS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135632 | IGKV1S57 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY KA.......P KLQSGVP.S WVSSSG..SG TEFTLTISGVQP GDAATYYC LDDIDTP | |
| ° | AF135633 | IGKV1S58 | [F] | DVVMTQTPSPVSAAV GGTVTINCQAS QSI......GSD LSWYQQKP GQPPKLLIY SA.......S KLATGVP.S RFSGSG..SG TQFTLTISGVQC DDAATYYC AARYSGNIY | |
| ° | AF135634 | IGKV1S59 | [F] | AAVLTQTPSPVSVAV GGTVTISCQSS QSVY....NNNW LSWYQQKP GQPPKLLIY GA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135635 | IGKV1S60 | [F] | DPVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135636 | IGKV1S61 | [F] | ALVMTQTPSSTSEPV GGTVTINCQAS QSI......GTR LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTISGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135637 | IGKV1S62 | [F] | DVVMTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC LGEFSSSSADC | |
| ° | AF135638 | IGKV1S63 | [F] | AAVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY GA.......S TLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135639 | IGKV1S64 | [F] | DPVLTQTASPVSAAV GGTVTISCQSS QSVY....NNNW LSWFQQKP GQPPKLLIY AA.......S NLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135640 | IGKV1S65 | [F] | YVMMTQTPSSVSEAV GGTVTIYCQAS QSV......SNL LAWYQQKP GQPPKLLIY GA.......S NLESGVP.S RFRGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135642 | IGKV1S66 | [F] | DPMLTQTASPVSAAV GSTVTISCQAS QSVY....NNNN LAWFQQKP GQPRKLLIY SA.......S TLASGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135643 | IGKV1S67 | [F] | DVVMTQTPSSKSAAV GDTVTIKCQAS QSI......SSY LSWYQQKP GQPPKLLIY RA.......S TLESGVP.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY | |
| ° | AF135644 | IGKV1S68 | [F] | AAVLTQTPSPVSVAV GGTVTINCQAS QSVY....NNNY LAWFQQKP GQPPKLLIY SA.......S TLASGVS.S RFKGSG..SG TQFTLTINGVQC DDAATYYC AARYSGNIY |
°: genomic DNA, but not known as being germline or rearranged.
| (1) | Two STOP-CODONs in CDR3-IMGT which may disappear during rearrangements. |
| (2) | ORF because of non canonical V-NONAMER: ACAACTCCC instead of ACAAAAACA. |
Created: 19/04/2000
Last updated: Wednesday, 29-Jun-2011 17:06:08 CEST
Authors: Domininique Scaviner and Fatena Bellahcene
Editor: Chantal Ginestoux
Contact: Marie-Paule Lefranc
Last updated: Wednesday, 29-Jun-2011 17:06:08 CEST
Authors: Domininique Scaviner and Fatena Bellahcene
Editor: Chantal Ginestoux
Contact: Marie-Paule Lefranc
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics
information system® http://www.imgt.org
(founder and director: Marie-Paule Lefranc, Montpellier, France)."
References to cite:
Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001);
Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003);
Lefranc, M.-P. et al.,
In Silico Biol., 5, 0006 (2004) [Epub],
5, 45-60 (2005);
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text;
Lefranc, M.-P. et al.,
Nucleic Acids Research 2009 37:
D1006-D1012; doi:10.1093/nar/gkn838
Full text.
For any other use please contact Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr.
IMGT founder and director: Marie-Paule Lefranc
Marie-Paule.Lefranc@igh.cnrs.fr
Bioinformatics manager: Véronique Giudicelli
Veronique.Giudicelli@igh.cnrs.fr
Computer manager: Patrice Duroux
Patrice.Duroux@igh.cnrs.fr
Webmaster: Chantal Ginestoux
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