IMGT reference directory: D-REGION Chondrichthyes IGHD set

The IMGT reference directory contains sets of allele sequences isolated from the IMGT reference sequences. By definition, these sets contain one sequence for each allele.

Authors: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT, and cited as "IMGT, the international ImMunoGeneTics information system® http://www.imgt.org (Initiator and coordinator: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001), Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003) Full text, Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

Species are designated with "short" names (the three first letters from the genus and species names):

for Raja erinacea (Little skate): Rajeri
for Raja eglanteria (Clearnose skate): Rajegl
for Carcharhinus leucas (Bull shark): Carleu
for Carcharhinus plumbeus (Sandbar shark): Carplu
for Heterodontus francisci (Horned shark): Hetfra
for Hydrolagus colliei (Spotted ratfish): Hydcol
for Ginglyomostoma cirratum (Nurse shark): Gincir
for Orectolobus maculatus (Spotted wobbegong shark) : Oremac 



>X15124_IGHD1*01_Rajeri         
TACAACAGTGGGT
>X15124_IGHD2*01_Rajeri                 
TATACTGG
>X15125_IGHD3*01_Rajeri                 
ACAGATCAACAGGGGGCAGATGA     
>X16146_IGHD4*01_Rajeri                 
CATGTGGGGT     
>X16146_IGHD5*01_Rajeri                 
CTATAGTAC     
>M29672_IGHD6*01_Rajeri                 
GCAGCCATGGGGGGCTCTATATAC     
>M29679_IGHD7*01_Rajeri                 
AGAGGGACAACAATGATC    
>U08009_IGHD1*01_Rajegl         
ACTATATGGGTGG
>U08009_IGHD2*01_Rajegl                 
ATACTGGCC
>U08010_IGHD3*01_Rajegl        
TCCCCCTATATGGGTGGAGACGAG     
>U08012_IGHD4*01_Rajegl                      
ACTATATGGGTGG     
>U08012_IGHD5*01_Rajegl                     
ACTATACTGGTACCT    
>AF336087_IGHD1*01_Oremac              
TACAGGGACACCAGATACGATAGGGAGTGTTACGATTGGGAGGTAC     
>AF336088_IGHD2*01_Oremac              
TTCTCTTTCATGGTTTATGGTCTCAGCTGCTACGGAGGA     
>AF336089_IGHD3*01_Oremac             
TGGGGCGAGAAGCCTCGGTATGGCGAAACCCGATATGCTTGCAACGGA     
>AF336090_IGHD4*01_Oremac              
TATATGATCGGCTACTCTGGGGATAGATGCTCGGAGTATAACTGGAGT     
>AF336091_IGHD5*01_Oremac              
TTGGCTACTCTGACTGCTCCGTACGAGCAACTGTACTCC     
>AF336092_IGHD6*01_Oremac              
TATGTTATAGCTACGATGGCACCTCTCTGCTACGCCAGCTATAGCTGG     
>AF336093_IGHD7*01_Oremac              
TGTGGGTATATCACTACCATAACTTTCCGCTGTGATGGAAGA     
>AF336094_IGHD8*01_Oremac              
TTTCGTCCGTTTATTCTGTACTGTAATGGTTAGAAGCGTTATCCG     
>AF003840_IGHD1*01_Hydcol         
GATACAGTGGGT
>AF003840_IGHD2*01_Hydcol         
GTATACATGGAC
>AF003946_IGHD3*01_Hydcol         
GGGTACAATGTATACAGTGTGTACACTGGAGTACTCATT      
>AF003839_IGHD4*01_Hydcol         
GAGATTCTAACTACGGGGTGGGAT     
>AF004359_IGHD5*01_Hydcol         
GGGTACAATGTATACAGTGTGTACACTGGAGTACTCATT     
>AF004360_IGHD6*01_Hydcol         
GGGTACAATGTATACAGTGTGTACACTGGAGTACTCAAT     
>AF003853_IGHD7*01_Hydcol         
GCCCGACAGTGGATACGTATAGAT      
>AF003841_IGHD8*01_Hydcol         
CTGTTTGAGGCGGGAAG  
>AF003841_IGHD9*01_Hydcol         
TATACGGGGCT   
>AF003854_IGHD10*01_Hydcol         
GATCGGGACACAGTGGGTAGCCGGAGGGGGTCG    
>AF003855_IGHD11*01_Hydcol         
GCGGATCGGGGTGGACAA     
>AF003856_IGHD12*01_Hydcol         
TATACAGTGGGTACCCGA    
>AF003857_IGHD13*01_Hydcol         
GAGAGTGGGTACCGAGAACTACGGATT     
>AF003858_IGHD14*01_Hydcol         
GACCACAGTAGGGGGAACCCAAAC     
>AF003859_IGHD15*01_Hydcol         
GGCCCCCACACAGTCGATTTCGGA     
>AF003860_IGHD16*01_Hydcol         
TTGATC          
>AF003861_IGHD17*01_Hydcol         
GATCCTGGGTCCGAC     
>X13447_IGHD1*01_Hetfra         
GGTACAGCAGTGGGT
>X13447_IGHD2*01_Hetfra        
ATATCTGGGTGG
>X13449_IGHD3*01_Hetfra         
GCCGGTACAGCAGTGCGTACAAGCATT     
>Z11777_IGHD4*01_Hetfra         
GGTACAGCGGTGGGT
>Z11777_IGHD5*01_Hetfra         
ATATACTGGATGG
>Z11778_IGHD6*01_Hetfra         
GGTACAGCAGTGGGT
>Z11779_IGHD7*01_Hetfra         
ATATACTGGATGG
>Z11776_IGHD8*01_Hetfra         
GGTACTACAGTGGGTAT
>Z11776_IGHD9*01_Hetfra         
TTATACTGGGTGG
>X13448_IGHD10*01_Hetfra         
AACATTACTACATTGGGTACA     
>X15171_IGHD11*01_Hetfra         
GGTACAGCAGTGGGT
>X15174_IGHD12*01_Hetfra        
ATATACTGGATGG
>Z11781_IGHD13*01_Hetfra         
CGGGCGCGTACACCGTACTGGG     
>Z11782_IGHD14*01_Hetfra         
AAGTACAGCGGCGGGATACAACAA     
>Z11783_IGHD15*01_Hetfra         
TGGTGCGGACCGAT     
>Z11784_IGHD16*01_Hetfra        
TGGGGCGATGGACAATACTGGA     
>Z11785_IGHD17*01_Hetfra         
GGCGGTGGGTCTGGGA     
>Z11786_IGHD18*01_Hetfra         
AGTACAGCGGTCCATATCGG     
>Z11787_IGHD19*01_Hetfra         
CGGGCAACAGCAGGGCTGGATGG    
>Z11788_IGHD20*01_Hetfra         
TGGTACAGCAGATT     
>Z11789_IGHD21*01_Hetfra         
GAGGACAGCGGTGGGAACTGGGGG     
>Z11791_IGHD22*01_Hetfra         
GAAATACGGTACTATGATGGATATGGGGC     
>Z11792_IGHD23*01_Hetfra         
GGTACAGTGGGTATATCTCCGGGTGGCG     
>X03748_IGHD24*01_Hetfra         
CAGAGGAACTAC     
>L38965_IGHD1*01_Gincir            
ATAACTGGGATTGA
>L38965_IGHD2*01_Gincir            
TTACTGTGAATAC
>L38965_IGHD3*01_Gincir            
TGATATGCTGTCGA
>L38966_IGHD4*01_Gincir            
ATAACTTTACTGTGGATAG
>L38966_IGHD5*01_Gincir            
TGCTGAGCTGGAGA
>L38967_IGHD6*01_Gincir           
ATAACTGGGATTGA
>L38967_IGHD7*01_Gincir            
TTACTGTGAATAC
>L38967_IGHD8*01_Gincir            
TGATATGCTGTCGA
>L38968_IGHD9*01_Gincir            
ATAGCTGGTGTGGA
>L38968_IGHD10*01_Gincir       
TAGCTGTGACTAC   
>L38968_IGHD11*01_Gincir            
TGCTGTGCTCTTGA
>M92851_IGHD12*01_Gincir            
CGCATGAGTGGGTATGAATACTTGGGCGGCCACTCC     
>AF327520_IGHD13*01_Gincir            
GGATCGACTGGGTGG     
>U18701_IGHD14*01_Gincir            
TGGGAAGCTGCTGATATGTGTATGTACGGGGTCTGCACTATTTATCCCTTCTCTGGT     
>U18680_IGHD15*01_Gincir             
TATAGGAAAAACTGGGCTTATGACTGCGGACTCGAAGAACTCGACTGGATTTATGTA     
>U18716_IGHD16*01_Gincir           
CGGGGTTCTGGTTATGGGTGCTTCAAATATGAAGTA      
>U18717_IGHD17*01_Gincir             
GGGGTGTGGGCCGGGGCTTACTGTGGCGAGGTCTGTAAGCTCACGGGC     
>U18686_IGHD18*01_Gincir             
TCGACCTGGTATACCGATATTGAAGGAGGGGAACTGGGTACCCCTTGTAATCGCCAGCATGATGTT     
>U18687_IGHD19*01_Gincir       
TCCTTATATAACTGGTGTAGCTGTGAAACAGATGTGCTCCCC          
>U18714_IGHD20*01_Gincir          
CCATGGGACTATGACTGCAACTACGATGTT       
>U18718_IGHD21*01_Gincir            
ATATCCTACTGTGACGATGTGGTCTGTGCTGCTAACTATGTT     
>U18713_IGHD22*01_Gincir            
GCCTGGTATGGGACTGGCTGCGTTATCTGGGGGCGTTTCTTGTATGATGTT     
>U18700_IGHD23*01_Gincir             
TGCAATGCCTGGTGTGGGGGGGACAAGGGACAGTGTGACTATCGCCTGCTGTGTTCT     
>U18702_IGHD24*01_Gincir           
GGACAATATCGGGGATGTCCCTACTTTCTGTGCTCTCACCTATCCTATGCTGGA      
>U18715_IGHD25*01_Gincir           
TGGCAGTGGGGGACCTGTGACGACCGGATCTGTGTTCACAACTCACGTGAC     
>U18726_IGHD26*01_Gincir           
CTGAGATGCGCATCTTGGTATCTGGATGATGTA     
>U18693_IGHD27*01_Gincir            
TGGCCTTCCTGGTCGGGCCATGGGTGTGAAAGTGACTGGGCTGTTGGGGGGGCC     
>U18725_IGHD28*01_Gincir           
GCCGGTACACATTCGGGATGTGCGCTGTGTTCTTTCATCCAAATTGAGGCTACC     
>U18685_IGHD29*01_Gincir           
TCAGTTGGTGTCATATATGCGCGCTGTCCGCCCTGTGATCGCCAA     
>U18688_IGHD30*01_Gincir           
GGTATGCTGCATGACTGCGACTGGTCGGACTATGATGTA     
>U18724_IGHD31*01_Gincir           
GCTTTGGACCGGGGCTATAGTTGTGACTGCTCTGCCCGTCAGGCTCGA     
>U18696_IGHD32*01_Gincir           
AATACCTATGCTTGTGCGTTTTCTTGCTCTTGGGAC     
>U18705_IGHD33*01_Gincir           
TGCGTTTCAAGTAGGTGTAGTGATGACTGTGACCACGGGAAGTCCTGTAACCTTGGC     
>U18703_IGHD34*01_Gincir           
TGCGGGGAATGCAGCTGGTGTGGTGGTAGCTGTGACTGGCTTCTGCTCTCGGGGGGGAATGGT     
>U18682_IGHD35*01_Gincir           
GACTGTTCGATCCTCGGGACTACCGCCCTGTGTAATCGATATAGTGAA     
>U18706_IGHD36*01_Gincir           
AACTGCGCTGGTACACCTGTGACTATTATCTGTAACCCTGTC     
>U18704_IGHD37*01_Gincir           
TGGGCGTATAGTTTCTGTCCTGTGACTACCTTCTGTGCTCTCGATGAGAACTATGAT     
>U18681_IGHD38*01_Gincir           
GGTTATGTCTGTGACTTCGCGGGCTCTTGTCACGGCGGTGACGAA     
>U18684_IGHD39*01_Gincir           
GGGCAATAGCTGTGACTACGACCTGTGCTCTTTGGGGTACACT     
>U18708_IGHD40*01_Gincir           
GGTGATAAAATTGTTGGGACGCCGAGCTGTGACTACCCAAAGCTGTGCTCTTCGGGATATGTTATA     
>U18722_IGHD41*01_Gincir           
GGGCTAATGGGCTGTGAGTATTGGCTGTGCGAGCCCCGCCATGGT     
>U18683_IGHD42*01_Gincir           
TCTGAGGCTGAAAACGCCGGCTGTGAATTCGGTTTCCTGTGTACGACTGACCCTTGGGCTGCA     
>U18690_IGHD43*01_Gincir           
TGCCGCTGGTGTGTGCCCCCCCGCCTC     
>U18695_IGHD44*01_Gincir           
TTTCGGCAGCTCCCGTGGACGGATTATAGTTGTGACCCGCGTCTGTGCTCCTCTGCGTTTGGT     
>U18712_IGHD45*01_Gincir           
TATGCCATGCGGTTTTTTGGCCCGACGCCGTGCTCTTGTGACGGC     
>U18719_IGHD46*01_Gincir           
TTCGGTAATAAGGGGGTGTTGAAGCGCGATAGTTGTGACCGACTCGAGTGCTCTCCCTCTGGT     
>U18691_IGHD47*01_Gincir           
TGGTGTATGACTGGGAGATCCCCCGCTTACAACTATGATGTA     
>U18694_IGHD48*01_Gincir           
CAGGGCTGGGAATATAGTGACTACCCCTGTGCTCTTCACCGGAATGTT     
>U18720_IGHD49*01_Gincir           
TCTCGTAGCTGGTGTGACTGCAATCTCCCCAAT     
>U18698_IGHD50*01_Gincir           
CGACGCTACAGCTGGTGTGGAGGGAGCTGTGACTACCTCAAACTCGCCGAAGACAACTCCTATGGA     
>U18692_IGHD51*01_Gincir           
GGGGCCAGGTGTGGATCGTCCGCTGTCGTCCTCTGTACTCTTAAC     
>U18707_IGHD52*01_Gincir           
GGCAATAGCTGTGACTACGATCTGTGCTCTTTGGGACACACG     
>U18699_IGHD53*01_Gincir           
GGACCGGCTGGTGTCTGTGGCCGCAACTGCGGAGGTACC     
>U18710_IGHD54*01_Gincir          
GCAGTGTATCGGCAATGTGCTTACTGGAGTTGTGCCCCGGCGGAA     
>U18689_IGHD55*01_Gincir           
GCCGACGATGTGGTCGTAAGGTCTAACTACGGGGTCGCCTGCTTGGCGGGATTT     
>U18709_IGHD56*01_Gincir           
AATTCCTATGCCTGTGACTTCGGGTGTTCTTGGCAC     
>U51450_IGHD57*01_Gincir               
GGATATCACAGCGGGCATGCTACTCCCTATTAT     
>U18697_IGHD58*01_Gincir           
GGGATACCTGGTGTGGATCCCTTGTACAGCTGTGATCTGTGCTCTTTACGGGTACCTTATGCTGTA     
>U18723_IGHD59*01_Gincir          
CTAGCCCAGTTGGGCTGTGACTACGGGTGCTCTTCGCGGTACAACTACTCT      
>U50611_IGHD1*01_Carleu
CAGCCAATTTTCCGAGATGGTATACGTTGG  
>U50612_IGHD2*01_Carleu
AGTAGCCCCTTCTATGGAGTAGGTAGGGGAATC     
>U50613_IGHD3*01_Carleu
GGAGCTGGTTTAGATTCTTTTGGTAGGGCAAATGGGAACT    
>U50614_IGHD4*01_Carleu
GGGGCTGACAGGGAG     
>U40560_IGHD1*01_Carplu              
ATCTATACAGGGGCTCTGGCTTGGGTA     
>U50605_IGHD2*01_Carplu            
ACCATTACAGGGGAGTTATATTTGGTGTCCGAAGAAACCGTTGTCGCTAGCCCT   
>U50604_IGHD3*01_Carplu              
GGGGAATACGAGTACTCTACGCCT     
>U50607_IGHD4*01_Carplu             
CCTCTACAGGCACCATACTGGTTGGAC     
>U50606_IGHD5*01_Carplu              
ATCCTTGGGGCGCCTATATATTTA     
>U50608_IGHD6*01_Carplu             
AACCAAGAGGGGTCACACTGGCTACGT     
>U50609_IGHD7*01_Carplu               
ATCTATACAGGGGCTCTGGTCTTGGGT     
>U50610_IGHD8*01_Carplu                
ATCTATACAGGGGAACTGGCTTGGGTA

Created: : 31/01/2002
Last updated: 22/07/2003

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