IMGT reference directory: V-REGION Non-human primates TRAV set
IMGT reference directory: V-REGION Non-human primates TRAV set
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The IMGT reference directory contains sets of allele sequences isolated from the IMGT reference sequences. By definition, these sets contain one sequence for each allele.
Authors: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)
Software material and data coming from IMGT server may be used for academic research only,
provided that it is referred to IMGT, and cited as "IMGT, the international ImMunoGeneTics
information system® http://www.imgt.org
(Initiator and coordinator: Marie-Paule Lefranc, Montpellier, France)."
References to cite: Lefranc, M.-P. et al.,
Nucleic Acids Research, 27, 209-212 (1999)
Cover of NAR;
Ruiz, M. et al.,
Nucleic Acids Research, 28, 219-221 (2000);
Lefranc, M.-P.,
Nucleic Acids Research, 29, 207-209 (2001), Lefranc, M.-P.,
Nucleic Acids Res., 31, 307-310 (2003)
Full text,
Lefranc, M.-P. et al.,
Nucleic Acids Res., 33, D593-D597 (2005)
Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.
Species are designated with "short" names
(the three first letters from the genus and species names):
for Aotus nancymaae (Ma's night monkey): Aotnan
>AF027543|TRAV5*01_Aotnan|(F)|V-REGION ..................................................CAGCGTCGTTATAAACTGCACTTACACAG ACAGTTCC..................TCCAGCTACTTATATTGGTATAAGCAAGAACCTGGAGCAAGTCTCCAGCTGCT GGCATATATTCTTTCA............AATACGGACACGAAACAAGACCAA.....................AGACTC ACTGTTCAATTGGATAAGAAGAATAAACATCTCTCTCTGAGCATTGCAGAAACACAGACTGGGGACTCAGCTATCTACT TCTGTGCAGAGAGTTCTGGGAGGA >AF027547|TRAV5*02_Aotnan|(F)|V-REGION ..................................................CAGCGTCGTTATAAACTGCACTTACACAG ACAGTTTC..................TCCAGCTACTTATATTGGTATAAGCAAGAACCTGGAGCAAGTCTCCAGCTGCT GGCATATATTCTTTCA............AATACGGACACGAAACAAGACCAA.....................AGACTC ACTGTTCAATTGGATAAGAAGAATAAACATCTCTCTCTGAGCATTGCAGAAACACAGACTGGGGACTCAGCTATCTACT TCTGTGCAGAGAAGGCCAAT >AF027549|TRAV5*03_Aotnan|(F)|V-REGION ..................................................CAGCGTCGTTATAAACTGCACTTACACAG ACAGTTTC..................TCCAGCTACTTATATTGGTATAAGCAAGAACCTGGAGCAAGTCTCCAGCTGCT GGCATATATTCTTTCA............AATACGGACACGAAACAAGACCAA.....................AGACTC ACTGTTCAATTGGATAAGAAGAATAAACATCTCTCTCTGAGCATTGCAGAAACACAGACTGGAGACTCAGCTATCTACT TCTGTGCAGAGAGTCCGTCAACAGATTAC >AF027554|TRAV5*04_Aotnan|(F)|V-REGION ..................................................CAGCGTCGTTATAAACTGCACTTACACAG ACAGTTTC..................TCCAGCTACTTATATTGGTATAAGCAAGAACCTGGAGCAAGTCTCCAGCTGCT GGCATATATTCTTTCA............AATACGGACACGAAACAAGACCAA.....................AGACTC ACTGTTCAATCGGATAAGAAGAATAAACATCTCTCTCTGAGCATTGCAGAAACACAGACTGGGGACTCAGCTATCTACT TCTGTGCAGAGAGTTCTGTATACCGGAGGAGCAATTGG >AF027557|TRAV9S1*01_Aotnan|(F)|V-REGION .............................AGTGCTCCTCAATGAAGGGGATTCCTTGACTGTGAACTGCTCTTATGAAT CCACAGGG..................TACCCTTCCCTTTTCTGGTATGTCCAATATCCTGGAAAAGGTCCAGAGCTCCT CCTGAAAGCCATGAAG............GGCAATGACAAGGGAAGAAGCAAC.....................ACAGAT TTTGAAGCCATATACCGTACAGAAACCACTTCTTTCCACTTGGAGAAAGGCTCAGTTCGAGAGTCAGACTCAGCTGTGT ACTTCTGTGCTCTGAGTGAACGGCAGGGA >AF027561|TRAV12S1*01_Aotnan|(F)|V-REGION ........GGTGGAGCAGGATCCTGGAGCCTTCAATGTTCCAGAGGGAACCACTGTTGCTTTCAACTGCACTTATAGCA ACAGTGTT..................TCTCAGTATTTCTTCTGGTACAGACAGGATCCCAGGAAAGGACCTAAGTTGCT GATGTCCGTATACTCC...............AGTGGTAAT...GAAGATGGA.....................AGGTTT ACAGCACAGCTTGATAGAGCCAGCCAGCATGTTTCCCTGCTCATCAGAGACTCCCAACTCAGTGACTCAGCCACCTACC TCTGTGCAGAGATCCGGCCCCTAATTCTGGTTCAAGCTGGCAA >AF027546|TRAV12S2*01_Aotnan|(F)|V-REGION ..................................................CATTGCCTCTCTCAACTGCACTTACAGTG ACCGAGGT..................TCTCAGTCCTTTTACTGGTACAGGCAATATTCTGGGAAAAGCCCCGAGTTGCT GATGTCTATATACTCC...............AATGGTGATGAAGAAGATGGA.....................AGGTTT ACAGCACAGCTCAATAGAGCCAGCCAGCATGTTTCCCTGCTCATCAGAGACTCCCAGCTCAGTGACTCAGCCACCTACC TCTGTGCAGTGAGCATCGACTTCAACAGA >AF027562|TRAV12S2*02_Aotnan|(F)|V-REGION ..................................................CATTGCCTCTCTCAACTGCACTTACAGTG ACCGAGGT..................TCTCAGTCCTTTTACTGGTACAGGCAATATTCTGGGAAAAGCCCCGAGTTGCT GATGTCTATATACTCC...............AATGGTGATGAAGAGGATGGA.....................AGGTTT ACAGCACAGCTCAATAGAGCCAGCCAGCATGTTTCCCTGCTCATCAGAGACTCCCAGCTCAGTGACTCAGCCACCTACC TCTGTGCAGTGCAGGATTCAGGAGGA >AF027560|TRAV13S1*01_Aotnan|(F)|V-REGION ..................................................CAGCTCTGTCATCAACTGTACTTATTCAG ACAGTGCC..................TCAAACTACTTCCCTTGGTATAAGCAAGAACTTGGAAAAGGACCTCGGCTCAT TATAGAGATTCGTTCA............AATGTGGACAAAAGGAAAGATGGA.....................AGAATG ACTGTTTTATTGAATAAGATGGCCAAACATTTCTCCCTGCACATCACAGACACCCAACCTGGAGACTCAGCTCTCTACT TCTGTGCAGTACTC >AF027548|TRAV13S1*02_Aotnan|(F)|V-REGION ..................................................CAGCTCTGTCATCAACTGTACTTATTCAG ACXGTGCC..................TCAAAXTACTTCCCTTGGTATAAGCAAGAACTTGGAAAAGGGCCTCGGCTCAT TATAGAGATTCGTTCA............AATGTGGACAAAAGGAAGGATGGA.....................AGAATG ACTGTTTTATTGAATAAGATGGCCAAACATTTCTCCCTGCACATCACAGACACCCAACCTGGAGACTCAGCTCTCTACT TCTGTGCCTCCGAT >AF027565|TRAV13S1*03_Aotnan|(F)|V-REGION ..................................................CAGCTCTGTCATCAACTGTACTTATTCAG ACAGTGCC..................TCAAGCTACTTCCCTTGGTATAAGCAAGAACTTGGAAAAGGACCTCGGCTCAT TATAGAGATTCGTTCA............AATGTGGACAAAAGGAAAGATGGA.....................AGAATG ACTGTTTTATTGAATAAGATGGCCAAACATTTCTCCCTGCACATCACAGACACCCAACCTGGAGACTCAGCTCTCTACT TCTGTGCAGCTGGT >AF027569|TRAV13S1*04_Aotnan|(F)|V-REGION ..................................................CAGCTCTGTCATCAACTGTACTTATTCAG ACAGTGCC..................TCAAACTACTTCCCTTGGTATAAGCAAGAACTTGGAAAAGGGCCTCGGCTCAT TATAGAGATTCGTTCA............AATGTGGACAAAAGGAAAGATGGA.....................AGAATG ACTGTTTTATTGAATAAGATGGCCAAACATTTCTCCCTGCACATCACAGACACCCAACCTGGAGACTCAGCTCTCTACT TCTGTGCAGCTGGT >AF027556|TRAV17*01_Aotnan|(F)|V-REGION ..................................................AAATGCCACAATGAACTGCAGTTACAAAA CTAGTATA.....................ACCAGTTTACAGTGGTATAGACAAGATTCAAGTAGAGGCCTTACCCAACT AATTTTAATACGCTCA............AATGAAAGAGAGAAATATAGTGGA.....................AGATTA AGAGTCACGCTTGACACGTTCACGAAAAGCAGTTCCTTGTTCGTCGCGGCTGCCCAGGCAGCAGACACTGCTGCTTACT TCTGTGCTACAAGA >AF027550|TRAV19*01_Aotnan|(F)|V-REGION ............ACTCAAGCTCAGACTGAAATTTCCGTGGTGGAGAAGGAAGATGTGACCTTGGACTGTTTGTATGAAA CCAGTGATACT...............ACTTACTACTTATACTGGTACAAACAACCACCAACTCGAGAAATGATTTTCCT TATTCGTCAGAACTCTTTT.........AATGAGCAAAATGAAATAAATGGT.....................CGGTAT TCTTGGAACTTCCAGAGATCCACCAGTTCCTTCAACTTCACCATCACAGCCTCACAAGTCATTGACTCAGCAGTGTATT TCTGTGCTCTGAGAGCC >AF027541|TRAV21*01_Aotnan|(F)|V-REGION ..................................................CGGCTTGGTTCTCAACTGCAGTTTCACTG ATAGCGCT..................ATTTACAACCTCCAGTGGTTTAGGCAGGATCCTGGGAAAGGTCTCACATCTCT CTTGTTAATTCAGTCA............AGTCAGAGAGAGCAAACAAGTGGA.....................AGACTT AATGCCTCACTGGATAAATCATCAGGACATAGTACTTTATACATTGCAGCTTCTCAGCCTGGTGACTCAGCCACCTACC TCTGTGCTGTGCGC >AF027558|TRAV29*01_Aotnan|(F)|V-REGION ..................................................ACTTTCTATTCTGAATTGTGACTATACTA GCAACATG..................TTTGATTATTTCCTATGGTACAAAAGATATCCTGCTGAAGGTCCTGCAATCCT GATATCTATACGTTCA............GCTACGGATCAAAATAAAGATGGA.....................AGATTC ACAGTCTTCTTAAACGAAAGTGCCAAGCACCTCTCTCTGCACATCGCGGCCTCCCAGCCTGGAGACTCTGCAGTGTACC TCTGTGCAGCAAGC
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