IMGT reference directory: V-REGION Non-human primates TRBV set

The IMGT reference directory contains sets of allele sequences isolated from the IMGT reference sequences. By definition, these sets contain one sequence for each allele.

Authors: Véronique Giudicelli (Veronique.Giudicelli@igh.cnrs.fr) and Marie-Paule Lefranc (Marie-Paule.Lefranc@igh.cnrs.fr)

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT, and cited as "IMGT, the international ImMunoGeneTics information system® http://www.imgt.org (Initiator and coordinator: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Research, 27, 209-212 (1999) Cover of NAR; Ruiz, M. et al., Nucleic Acids Research, 28, 219-221 (2000); Lefranc, M.-P., Nucleic Acids Research, 29, 207-209 (2001), Lefranc, M.-P., Nucleic Acids Res., 31, 307-310 (2003) Full text, Lefranc, M.-P. et al., Nucleic Acids Res., 33, D593-D597 (2005) Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

Species are designated with "short" names (the three first letters from the genus and species names):

for Aotus nancymaae (Ma's night monkey): Aotnan





>AF107760|TRBV2*01_Aotnan|(F)|V-REGION
.......................CAGCCATCAGGTCACACGGATGGGACAGGAAGTGATCTTGCGGTGTGTCCCCATCC
CCAATCAC.....................TTAAACTTCTTTTGGTACAGACAAATTTTGGGGAAGAAATTCGAGTTTCT
GGTTTACTTCTATAAT............GATAACATCTCAGACAAGTCTGAAATATTCGATGATAGATTCTCAGTTAAA
AGGCCT...GATGGATCAAATTTTACTCTGAAGATTCAATCCACAAAGCCAGAGGACTCAGCCATGTACTTCTGTGCCA
GCAG
>AF107746|TRBV4S1*01_Aotnan|(F)|V-REGION
.......................AAAACACCTGGTCATGGGAATGACAAATGAGAAGTCTTTGGAATGTGAACAACACC
TGGGGCAC.....................AATGCTATGTACTGGTACAAGCAGAAAGCTAAGAGGCCGCCAGAGCTCAT
GTTTGTCTACAACTAT............AAGGAAATCTATGTAAATGAAAGTGTGCCC...ATTCGCTTCTCACCTGAA
TGCCCC...GACAGCTCTCACTTACACCTTCACCTACACGCCCTGCAGCCAGAAGACTCGGCCCTGTATCTCTGCGCCA
GCAGCCAAGA
>AF107737|TRBV4S2*01_Aotnan|(F)|V-REGION
.......................AAAACACCTGGTCACGGGAATGACAAATGAGAAGTCTTTGGAATGTGAACAACATC
TGGGGCAC.....................AATGCTATGTACTGGTACAAGCAGAAAGCTAAGAGGCCGCCGGAGCTCAT
GTTCATCTACAGACTT............CAAGAACAGACTGAAAACAATAGTGTGCCC...AGTCGCTTCTCACCTGAA
TGCCCC...GACAGCTCTCACTTACACCTTCACCTACACGCCCTGCAGCCAGAAGACTCAGCCCTGTATCTCTGCACCA
GCAGCCAAGA
>AF107757|TRBV5S1*01_Aotnan|(F)|V-REGION
.......................AAGACACCTGATCAAAATGAGAGGACAGCAAGTGACACTGAGGTGCTCCCCTATCT
CTGGGCAT.....................GACAGAGTGTCCTGGTACCAACAGGCCCCAGGACAGGGCCCTCAGTTCCT
CTTCGAATACTACAAT............GAGATACAGAATGATAAAGGAAACTTCCCT...GCTCGATTCTCAGGGCGC
CAGTTC...TCTAACTATAGCTCTGAGATGAATGTGAGCGGCTTGGAGCTGGGGGACTCGGCCCTTTATCTTTGTGCCA
GCAAC
>AF107759|TRBV5S2*01_Aotnan|(F)|V-REGION
.......................AAGACACCTGATCAAAATGAGAGGACAGCAAGTGACACTGAGGTGCTCCCCTATCT
CTGGGCAT.....................AACAGCGTGTACTGGTACCAACAGGCCCCAGGACAGGACCCTCAGTTCCT
CTTCGAATACTACAAT............GAGATACAGAATGATAAAGGAAACTTCCCT...GCTCGATTCTCAGGGCGC
CAGTTC...TCTAACTATAGCTCTGAGATGGATGTGAGCGGCTTGGAGCTGGGGGACTCAGCCCTTTATCTTTGTGCCA
GCAAC
>AF107747|TRBV6S1*01_Aotnan|(F)|V-REGION
.......................AAAATTCCAGGTCCTGAAGACAGGACAGAGCATGACGCTGCAGTGTGCCCAGGATA
TGAACCAT.....................GACGGCATGTACTGGTATCGACAAGACCCAGGCATGGGGCTGAGGCTGAT
TCATTACTCAGTTGCT............GAAGGTACCACTGCCAAAGGAGAAGTCTCC...GATGGCTACAATGTCTCC
AGATCA...AACACAGAGGATTTCCCGCTCAGGCTGGAGGCAGCTGCTCCCTCCCAGACATCTGTGTACTTCTGTGCCA
GCAGTTAC
>AF107752|TRBV6S2*01_Aotnan|(F)|V-REGION
.......................AAAATTCCAGGTCCTGAAGACAGGACAGAGCATGACGCTGCAGTGTGCCCAGGATA
TGAACCAT.....................GACGGCATGTACTGGTATCGACAAGACCCAGGCATGGGGCTGAGGCTGAT
TCATTACTCAGCTGGT............GAAGGTACCACTGACAAAGGAGAAGTCTCC...GAAGGCTACAAGGTCTCC
AGATCA...AACACAGAGGATTTCCCGCTCAGGCTGGAGGCAGCTGCTCCCTCCCAGACATCTGTATACTTCTGTGCCA
GCAGTTAC
>AF107753|TRBV7S1*01_Aotnan|(F)|V-REGION
.......................CAGGTACAAAGTCACAAAGAGGGGACAGGATATAGCTTTCAGGTGTGATCCAATTT
CGGGTCAT.....................GTAATGCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCGGTTCTCCGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGCTCA
>AF107741|TRBV7S2*01_Aotnan|(F)|V-REGION
.......................CAGGTACAAAGTCACAAAGAGGGGACAGGATATATCTTTCAGGTGTGATCCAATTT
CGGGTCAT.....................GAAATGCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCGGTTCTCCGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGCTCA
>AF107758|TRBV7S3*01_Aotnan|(F)|V-REGION
.......................CAGGTACAAAGTCACAAAGAGGGGACAGGATATATCTTTCAGGTGTGATCCAATTT
CGGGTCAT.....................GAAATGCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCGGTTCTCTGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCACACGGAGCAGCGGGACTTTGCCATGTATCTCTGTGCCA
GCAGCTCA
>AF107748|TRBV7S4*01_Aotnan|(F)|V-REGION
.......................CAGGTACAAAGTCACAAAGAGGGGACAGGATATAGCTTTCAGGTGTGATCCAATTT
CGGGTCAT.....................GTAATGCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCAGTTCTCTGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCACACGGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGCACA
>AF107750|TRBV7S5*01_Aotnan|(F)|V-REGION
.......................CAGGTACAAAGTCACAAAGAGGGGACAGGATATATCTTTCAGGTGTGATCCAATTT
CGGGTCAT.....................GAAATGCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCGGTTCTCTGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCACACGGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGCGGG
>AF107749|TRBV7S6*01_Aotnan|(F)|V-REGION
.......................CAGACACAAGGTTACAAAGACGGGACAGAATGTAACTTTTGGGTGTGATCCAATTT
CTGGACAC.....................AACCGCCTTTATTGGTACCGACAGACCCTGGAGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGTAT............GAAGTTCAACAAGACAAATCAGGGCTACCCAGTGATCGGTTCTCCGCAGAG
AGGGCT...GAGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGC
>AF107755|TRBV7S7*01_Aotnan|(F)|V-REGION
.......................CAGACACAAGGTTACAAAGACGGGACAGAATGTAACTTTTGGGTGTGATCCAATTT
CTGGACAC.....................AACCGCCTTTATTGGTACCGACAGACCCTGGGGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGAAT............GAAGCTCAACTGGACAAATCAGGGCTGCCCAGTGATCGGTTCTTTGCAGAG
AGGACT...GGGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAAAGCAGGGGGACTCGGCCATGTATCTCTGTGCCA
GCAGC
>AF107740|TRBV7S7*02_Aotnan|(F)|V-REGION
.......................CAGACACAAGGTTACAAAGACGGGACAGAATGTAACTTTTGGGTGTGATCCAATTT
CTGGACAC.....................AACCGCCTTTATTGGTACCGACAGACCCTGGGGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGAAT............GAAGCTCAACTAGACAAATCAGGGCTGCCCAGTGATCGGTTCTTTGCAGAG
AGGACT...GGGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAAAGCAGGGGGACTCGGCCATGTATCTCTGTGCCA
GCAGC
>AF107736|TRBV7S8*01_Aotnan|(F)|V-REGION
.......................CAGACACAAGGTTACAAAGACGGGACAGAATGTAACTTTTGGGTGTGATCCAATTT
CTGGACAC.....................AACCGCCTTTATTGGTACCGACAGACCCTGGGGCAGAGCCCAGAGTTTCT
GACTTACTTCCAGAAT............GAAGCTCAACTAGACAAATCAGGGCTGCCCAGTGATCGGTTCTTTGCAGAG
AGGACT...GGGGGATCCTTCTCCACTCTGAAGATCCAGCGCACAGAGCAGCGGGACTCTGCCATGTATCTCTGTGCCA
GCAGC
>AF107756|TRBV9*01_Aotnan|(F)|V-REGION
.......................AAAGCACCTGCTCACAGCAATTGGACAGCGAGTGGCACTGAGATGCTCCCCTAGGC
CTGGAGAC.....................CTCTCTGTGTACTGGTACCAACAGAGCCTGGACCAGAGCCTCCAGTTCCT
CATTCAGTATTATAAT............GGGAATGAGAGAGAAAAAGGAAACATTCCT...GAACGATTCTCAGGACAA
CAGTTC...CCTAACATGAGCTCTGAACTAAACCTGAGCTCTTTGGAGCTGGGGGACTCGGCTTTGTATTTCTGTGCCA
GCAGCGTTG
>AF107745|TRBV9*02_Aotnan|(F)|V-REGION
.......................AAAGCACCTGCTCACAGCAATTGGACAGCGAGTGGCACTGAGATGCTCCCCTAGGT
CTGGAGAC.....................CTCTTTGTGTACTGGTACCAACAGAGCCTGGACCAGAGCCTCCAGTTCCT
CATTCAGTATTATAAT............GGGAATGAGAGAGAAAAAGGAAACATTCCT...GAACGATTCTCAGGACAA
CAGTTC...CCTAACATGAGCTCTGAACTAAACCTGAGCTCTTTGGAGCTGGGGGACTCGGCTTTGTATTTCTGTGCCA
GCAGCTCGT
>AF107742|TRBV12S1*01_Aotnan|(F)|V-REGION
.......................AAGGCACAAGGTGACAGAGATGGGACAAGAAGTAATTATGAGATGTCAGCCAATTC
TTGGCCAC.....................AATACTGTTTTCTGGTATAGACAGACCGTGATGCAAGGACTGGAGTTGCT
GACTTACTTCCGCAAC............CAGCCTTCTCTAGATGATTCAGGGATGCCCGAGGATCGATTGTCAGCAGAG
ATGCCT...ACTGCATCTTTATCCTCTCTGAAGATCCAGCCTTCAGAACCCAGGGACTCAGCTGTGTATCTTTGTGCCA
GTGG
>AF107754|TRBV15*01_Aotnan|(F)|V-REGION
.......................AAGATACCAGGTTATCCAGTTGGGAAAGCCAGTGACTCTGAGCTGTTCTCAGGATC
TGAACCAT.....................GATGCCATGTACTGGTACCAGCAGAAGCCAAGTCAGCCCCCAAAGCTGCT
GTTATACTACTATGAC............AAAGATTTGAACAATGAAGCAGACACGCCT...GATAACTTCCAAGCCAGG
AGGCCG...AATACCTCTTTCTGCTTTCTTGACATCCGCTCATCAGGCCTGGGGGATGCGGCCACATACCTGTGTGCCA
GCAGC
>AF107751|TRBV24S1*01_Aotnan|(F)|V-REGION
...........................................AAGGAAAGAAGATTATGCTGGAATGTTCTCAGACTA
AGGGTCAT.....................GATCAAATGTACTGGTATCGACAAGACCCAGGACTGGGGCTACGGTTGAT
CTACTACTCCCTTGGT............GTCCGAGATATAAACAAAGGAGAGATCTCT...GATGGATACAGTGTCTCT
CGACAG...GAACAGCCTAAATTCTCCCTGTCCCTAGAGTCTGCCACCCCCAACCACACAGCTCTTTACTTCTGTGCCA
CCAGTTATT
>AF107739|TRBV28*01_Aotnan|(F)|V-REGION
.......................GAGATATCTAGTCAAAAGGATGGGAGAGAAAGTTTTTCTGGAATGTGCCCAGGACA
TGGACCAT.....................GAAAGAATGTTCTGGTACCGACAAGACCCAGGTCTGGGGCTACGGCTGAT
CTATTTCTCCTATGAT............ATTACAAACGATGAAAAAGGAGATGTTCCT...GACGGGTACAGCGTCTCT
AGAGAG...AAGAAGGAGCAGTTCTCCCTGATTCTGGGGTCTGCCAGCACCAACCAGACATCTGTGTACCTCTGCGCCA
GTAGCT

Created: 22/07/2003
Last modified: 22/07/2008

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