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Correspondence between the IMGT unique numbering for G-DOMAIN and the different numberings (vertical display of examples)

Citing this page:
"IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN" M.-P., Lefranc et al., Dev. Comp. Immunol., 29, 917-938 (2005). PMID: 15936075 pdf with permission from Elsevier
IMGT
G-DOMAIN
and
G-LIKE-DOMAIN
labels (1)
IMGT
unique numbering
for G-DOMAIN
and
G-LIKE-DOMAIN (1)
MHC-Ia (2) MHC-IIa (2) MHC-IIb (2)
I-ALPHA chain II-ALPHA chain II-BETA chain II-ALPHA chain II-BETA chain
HLA-A*0201 (3) HLA-DRA*0101 (3) HLA-DRB1*1402 (3) HLA-DMA*01 (3) HLA-DMB*01 (3)
G-ALPHA1 [D1] domain G-ALPHA2 G-ALPHA [D1] domain G-BETA [D1] domain G-ALPHA [D1] domain G-BETA [D1] domain
A-STRAND 1.1 1 gct ALA (A)
1.9 2 cct PRO P
1.8 3 act THR T
1.7 4 cca PRO P
1.6 5 atg MET M
1.5 6 tgg TRP W
1.4 7 cca PRO P
1.3 8 gat ASP D
1.2 1 atc ILE I 9 gac ASP D
1.1 2 aaa LYS K 10 ctg LEU L
1 1 ggc GLY (G) 91 ggt GLY (G) 3 gaa GLU (E) 1 cca PRO (P) 11 caa GLN Q 1 ggt GLY (G)
2 2 tct SER S 92 tct SER S 4 gaa GLU E 2 cgt ARG R 12 aac ASN N 2 ggc GLY G
3 3 cac HIS H 93 cac HIS H 5 cat HIS H 3 ttc PHE F 13 cac HIS H 3 ttc PHE F
4 4 tcc SER S 94 acc THR T 6 gtg VAL V 4 ttg LEU L 14 aca THR T 4 gtg VAL V
5 5 atg MET M 95 gtc VAL V 7 atc ILE I 5 gag GLU E 15 ttc PHE F 5 gcc ALA A
6 6 agg ARG R 96 cag GLN Q 8 atc ILE I 6 tac TYR Y 16 ctg LEU L 6 cat HIS H
7 7 tat TYR Y 97 agg ARG R 9 cag GLN Q 7 tct SER S 17 cac HIS H 7 gtg VAL V
7A --- --- - --- --- - --- --- - --- --- - --- --- - --- --- -
8 8 ttc PHE F 98 atg MET M 10 gcc ALA A 8 acg THR T 18 aca THR T 8 gaa GLU E
9 9 ttc PHE F 99 tat TYR Y 11 gag GLU E 9 tct SER S 19 gtg VAL V 9 agc SER S
10 10 aca THR T 100 ggc GLY G 12 ttc PHE F 10 gag GLU E 20 tac TYR Y 10 acc THR T
11 11 tcc SER S 101 tgc CYS C 13 tat TYR Y 11 tgt CYS C 21 tgc CYS C 11 tgt CYS C
12 12 gtg VAL V 102 gac ASP D 14 ctg LEU L 12 cat HIS H 22 cag GLN Q 12 ctg LEU L
13 13 tcc SER S 103 gtg VAL V 15 aat ASN N 13 ttc PHE F 23 gat ASP D 13 ttg LEU L
14 14 cgg ARG R 104 ggg GLY G 16 cct PRO P 14 ttc PHE F 24 ggg GLY G 14 gat ASP D
AB-TURN 15 15 ccc PRO P 105 tcg SER S --- --- - 15 aat ASN N --- --- - 15 gat ASP D
16 16 ggc GLY G 106 gac ASP D --- --- - 16 ggg GLY G --- --- - 16 gct ALA A
17 17 cgc ARG R 107 tgg TRP W --- --- - 17 acg THR T --- --- - 17 ggg GLY G
B-STRAND 18 18 ggg GLY G 108 cgc ARG R --- --- - 18 gag GLU E --- --- - 18 act THR T
19 19 gag GLU E 109 ttc PHE F 17 gac ASP D 19 cgg ARG R 25 agt SER S 19 cca PRO P
20 20 ccc PRO P 110 ctc LEU L 18 caa GLN Q 20 gtg VAL V 26 ccc PRO P 20 aag LYS K
21 21 cgc ARG R 111 cgc ARG R 19 tca SER S 21 cgg ARG R 27 agt SER S 21 gat ASP D
22 22 ttc PHE F 112 ggg GLY G 20 ggc GLY G 22 ttc PHE F 28 gtg VAL V 22 ttc PHE F
23 23 atc ILE I 113 tac TYR Y 21 gag GLU E 23 ctg LEU L 29 gga GLY G 23 aca THR T
24 24 gca ALA A 114 cac HIS H 22 ttt PHE F 24 gag GLU E 30 ctc LEU L 24 tac TYR Y
25 25 gtg VAL V 115 cag GLN Q 23 atg MET M 25 aga ARG R 31 tct SER S 25 tgc CYS C
26 26 ggc GLY G 116 tac TYR Y 24 ttt PHE F 26 tac TYR Y 32 gag GLU E 26 atc ILE I
27 27 tac TYR Y 117 gcc ALA A 25 gac ASP D 27 ttc PHE F 33 gcc ALA A 27 tcc SER S
28 28 gtg VAL V 118 tac TYR Y 26 ttt PHE F 28 cat HIS H 34 tac TYR Y 28 ttc PHE F
BC-TURN 29 29 gac ASP D 119 gac ASP D 27 gat ASP D 29 aac ASN N 35 gac ASP D 29 aac ASN N
30 30 gac ASP D 120 ggc GLY G 28 ggt GLY G 30 cag GLN Q 36 gag GLU E 30 aag LYS K
C-STRAND 31 31 acg THR T 121 aag LYS K 29 gat ASP D 31 gag GLU E 37 gac ASP D 31 gat ASP D
32 32 cag GLN Q 122 gat ASP D 30 gag GLU E 32 gag GLU E 38 cag GLN Q 32 ctg LEU L
33 33 ttc PHE F 123 tac TYR Y 31 att ILE I 33 aac ASN N 39 ctt LEU L 33 ctg LEU L
34 34 gtg VAL V 124 atc ILE I 32 ttc PHE F 34 gtg VAL V 40 ttc PHE F 34 acc THR T
35 35 cgg ARG R 125 gcc ALA A 33 cat HIS H 35 cgc ARG R 41 ttc PHE F 35 tgc CYS C
36 36 ttc PHE F 126 ctg LEU L 34 gtg VAL V 36 ttc PHE F 42 ttc PHE F 36 tgg TRP W
37 37 gac ASP D 127 aaa LYS K 35 gat ASP D 37 gac ASP D 43 gac ASP D 37 gat ASP D
38 38 agc SER S 128 gag GLU E 36 atg MET M 38 agc SER S 44 ttt PHE F 38 cca PRO P
CD-TURN 39 39 gac ASP D 129 gac ASP D 37 gca ALA A 39 gac ASP D 45 tcc SER S 39 gag GLU E
40 40 gcc ALA A --- --- - --- --- - --- --- - --- --- - --- --- -
41 41 gcg ALA A --- --- - --- --- - --- --- - --- --- - --- --- -
D-STRAND 42 42 agc SER S 130 ctg LEU L 38 aag LYS K 40 gtg VAL V 46 cag GLN Q 40 gag GLU E
43 43 cag GLN Q 131 cgc ARG R 39 aag LYS K 41 ggg GLY G 47 aac ASN N 41 aat ASN N
44 44 agg ARG R 132 tct SER S 40 gag GLU E 42 gag GLU E 48 act THR T 42 aag LYS K
45 45 atg MET M 133 tgg TRP W 41 acg THR T 43 tac TYR Y 49 cgg ARG R 43 atg MET M
46 46 gag GLU E 134 acc THR T 42 gtc VAL V 44 cgg ARG R 50 gtg VAL V 44 gcc ALA A
47 47 ccg PRO P 135 gcg ALA A 43 tgg TRP W 45 gcg ALA A 51 cct PRO P 45 cct PRO P
48 48 cgg ARG R 136 gcg ALA A 44 cgg ARG R 46 gtg VAL V 52 cgc ARG R 46 tgc CYS C
49 49 gcg ALA A 137 gac ASP D 45 ctt LEU L 47 acg THR T 53 ctg LEU L 47 gaa GLU E
49.1 --- --- - --- --- - --- --- - --- --- - --- --- - 48 ttt PHE F
49.2 --- --- - --- --- - --- --- - --- --- - --- --- - 49 ggg GLY G
49.3 --- --- - --- --- - --- --- - --- --- - --- --- - 50 gtg VAL V
49.4 --- --- - --- --- - --- --- - --- --- - --- --- - 51 ctg LEU L
49.5 --- --- - --- --- - --- --- - --- --- - --- --- - --- --- -
HELIX 50 50 ccg PRO P 138 atg MET M 46 gaa GLU E 48 gag GLU E 54 ccc PRO P 52 aat ASN N
51 51 tgg TRP W 139 gca ALA A 47 gaa GLU E 49 ctg LEU L 55 gaa GLU E 53 agc SER S
52 52 ata ILE I 140 gct ALA A 48 ttt PHE F 50 ggg GLY G 56 ttt PHE F 54 ttg LEU L
53 53 gag GLU E 141 cag GLN Q 49 gga GLY G 51 cgg ARG R 57 gct ALA A 55 gcg ALA A
54 54 cag GLN Q 142 acc THR T 50 cga ARG R 52 cct PRO P 58 gac ASP D 56 aat ASN N
54A --- --- - --- --- - --- --- - --- --- - --- --- - --- --- -
55 55 gag GLU E 143 acc THR T --- --- - 53 gat ASP D --- --- - 57 gtc VAL V
56 56 ggt GLY G 144 aag LYS K --- --- - 54 gcc ALA A --- --- - 58 ctc LEU L
57 57 ccg PRO P 145 cac HIS H --- --- - 55 gag GLU E --- --- - 59 tca SER S
58 58 gag GLU E 146 aag LYS K --- --- - 56 tac TYR Y --- --- - 60 cag GLN Q
59 59 tat TYR Y 147 tgg TRP W 51 ttt PHE F 57 tgg TRP W 59 tgg TRP W 61 cac HIS H
60 60 tgg TRP W 148 gag GLU E 52 gcc ALA A 58 aac ASN N 60 gct ALA A 62 ctc LEU L
61 61 gac ASP D 149 gcg ALA A 53 agc SER S 59 agc SER S 61 cag GLN Q 63 aac ASN N
61A --- --- - 150 gcc ALA A --- --- - 60 cag GLN Q 62 gaa GLU E 64 caa GLN Q
61B --- --- - --- --- - --- --- - 61 aag LYS K 63 cag GLN Q 65 aaa LYS K
62 62 ggg GLY G 151 cat HIS H 54 ttt PHE F 62 gac ASP D 64 gga GLY G 66 gac ASP D
63 63 gag GLU E 152 gtg VAL V 55 gag GLU E 63 ctc LEU L 65 gat ASP D 67 acc THR T
64 64 aca THR T 153 gcg ALA A 56 gct ALA A 64 ctg LEU L 66 gct ALA A 68 ctg LEU L
65 65 cgg ARG R 154 gag GLU E 57 caa GLN Q 65 gag GLU E 67 cct PRO P 69 atg MET M
66 66 aaa LYS K 155 cag GLN Q 58 ggt GLY G 66 cag GLN Q 68 gcc ALA A 70 cag GLN Q
67 67 gtg VAL V 156 ttg LEU L 59 gca ALA A 67 agg ARG R 69 att ILE I 71 cgc ARG R
68 68 aag LYS K 157 aga ARG R 60 ttg LEU L 68 cgg ARG R 70 tta LEU L 72 ttg LEU L
69 69 gcc ALA A 158 gcc ALA A 61 gcc ALA A 69 gcc ALA A 71 ttt PHE F 73 cgc ARG R
70 70 cac HIS H 159 tac TYR Y 62 aac ASN N 70 gcg ALA A 72 gac ASP D 74 aat ASN N
71 71 tca SER S 160 ctg LEU L 63 ata ILE I 71 gtg VAL V 73 aaa LYS K 75 ggg GLY G
72 72 cag GLN Q 161 gag GLU E 64 gct ALA A 72 gac ASP D 74 gag GLU E 76 ctt LEU L
72A --- --- - 162 ggc GLY G --- --- - 73 acc THR T --- --- - 77 cag GLN Q
73 73 act THR T 163 acg THR T 65 gtg VAL V 74 tac TYR Y 75 ttc PHE F 78 aat ASN N
74 74 cac HIS H 164 tgc CYS C 66 gac ASP D 75 tgc CYS C 76 tgc CYS C 79 tgt CYS C
75 75 cga ARG R 165 gtg VAL V 67 aaa LYS K 76 aga ARG R 77 gag GLU E 80 gcc ALA A
76 76 gtg VAL V 166 gag GLU E 68 gcc ALA A 77 cac HIS H 78 tgg TRP W 81 aca THR T
77 77 gac ASP D 167 tgg TRP W 69 aac ASN N 78 aac ASN N 79 atg MET M 82 cac HIS H
78 78 ctg LEU L 168 ctc LEU L 70 ctg LEU L 79 tac TYR Y 80 atc ILE I 83 acc THR T
79 79 ggg GLY G 169 cgc ARG R 71 gaa GLU E 80 ggg GLY G 81 cag GLN Q 84 cag GLN Q
80 80 acc THR T 170 aga ARG R 72 atc ILE I 81 gtt VAL V 82 caa GLN Q 85 ccc PRO P
81 81 ctg LEU L 171 tac TYR Y 73 atg MET M 82 ggt GLY G 83 ata ILE I 86 ttc PHE F
82 82 cgc ARG R 172 ctg LEU L 74 aca THR T 83 gag GLU E 84 ggg GLY G 87 tgg TRP W
83 83 ggc GLY G 173 gag GLU E 75 aag LYS K 84 agc SER S 85 cca PRO P 88 gga GLY G
84 84 tac TYR Y 174 aac ASN N 76 cgc ARG R 85 ttc PHE F 86 aaa LYS K 89 tca SER S
85 85 tac TYR Y 175 ggg GLY G 77 tcc SER S 86 aca THR T 87 ctt LEU L 90 ctg LEU L
86 86 aac ASN N 176 aag LYS K 78 aac ASN N 87 gtg VAL V 88 gat ASP D 91 acc THR T
87 87 cag GLN Q 177 gag GLU E 79 tat TYR Y 88 cag GLN Q 89 ggg GLY G 92 aac ASN N
88 88 agc SER S 178 acg THR T 80 act THR T 89 cgg ARG R 90 aaa LYS K 93 agg ARG R
89 89 gag GLU E 179 ctg LEU L 81 ccg PRO P 90 cga ARG R 91 atc ILE I 94 aca THR T
90 90 gcc ALA A 180 cag GLN Q 82 atc ILE I --- --- - 92 ccg PRO P --- --- -
91 --- --- - 181 cgc ARG R 83 acc THR T --- --- - 93 gtg VAL V --- --- -
92 --- --- - 182 acg THR T 84 aat ASN N --- --- - 94 tcc SER S --- --- -
92A --- --- - --- --- - --- --- - --- --- - 95 aga ARG R --- --- -
More information:
IMGT notes:
  1. (1) The IMGT unique numbering for G-DOMAIN and G-LIKE-DOMAIN defined by Marie-Paule Lefranc (© Copyright IMGT 15/05/2002) is shown in the first column. Unoccupied positions according to the IMGT unique numbering for G-DOMAIN and G-LIKE-DOMAIN are shown with dashes.
  2. (2) Amino acids which result from the splicing between exon 1 and exon 2 are shown between parentheses.
  3. (3) Accession numbers of HLA-A*0201: K02883; HLA-DRA*0101: J00204; HLA-DRB101402: AJ297583; HLA-DMA*01: X62744; HLA-DMB*01: X76776.
Created:
13/09/2002
Last updated:
Wednesday, 10-Feb-2021 16:54:35 CET
Authors:
Phani Vijay Garapati, Elodie Duprat, Aude Thiriot and Marie-Paule Lefranc
Editor:
Chantal Ginestoux
Scientific officer:
Marie-Paule Lefranc