Positions were determined on the NCBI 36 assembly of the human genome (November 2005).
IMGT | NCBI | ENSEMBL | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene | Chromosomal localization | Gene orientation on chromosome | Gene in locus | Gene in sequence | Gene positions on chromosome | Sequence accession number | Gene positions in sequence | Gene orientation in sequence | Gene positions on chromosome | Sequence accession number | Clone name | Gene positions in sequence | Gene orientation in sequence | |||||
Locus | Positions | Orientation | IMGT/LIGM-DB accession number | IMGT labels | Positions | Orientation | ||||||||||||
TRGC2 | 7p14 | REV | TRG | M13231 | EX3 | 836..976 | sense | 38246153..38246293 | NT_007819.16 | 37768586..37768726 | -1 | 38246153..38246293 | AC006033.2.1.171816 | 60926..61066 | -1 | |||
TRGC2 | 7p14 | REV | TRG | M13231 | EX2 | 788..835 | sense | 38248555..38248602 | NT_007819.16 | 37770988..37771035 | -1 | 38248555..38248602 | AC006033.2.1.171816 | 63328..63375 | -1 | |||
TRGC2 | 7p14 | REV | TRG | M13231 | EX2T | 740..787 | sense | 38251310..38251357 | NT_007819.16 | 37773743..37773790 | -1 | 38251310..38251357 | AC006033.2.1.171816 | 66083..66130 | -1 | |||
TRGC2 | 7p14 | REV | TRG | M15002 | EX1 | 1..330 | sense | 38255369..38255698 | NT_007819.16 | 37777802..37778131 | -1 | 38255369..38255698 | AC006033.2.1.171816 | 70142..70471 | -1 | |||
TRGJ2 | 7p14 | REV | TRG | 120458..120535 | M12960 | J-RS+J-REGION | 129..206 | sense | 38259506..38259583 | NT_007819.16 | 37781939..37782016 | -1 | 38259506..38259583 | AC006033.2.1.171816 | 74279..74356 | -1 | ||
TRGJP2 | 7p14 | REV | TRG | 117491..117578 | M16016 | J-RS+J-REGION | 1..88 | sense | 38262463..38262550 | NT_007819.16 | 37784896..37784983 | -1 | 38262463..38262550 | AC006033.2.1.171816 | 77236..77323 | -1 | ||
TRGC1 | 7p14 | REV | TRG | M14998 | EX3 | 174..313 | sense | 38266217..38266356 | NT_007819.16 | 37788650..37788789 | -1 | 38266217..38266356 | AC006033.2.1.171816 | 80990..81129 | -1 | |||
TRGC1 | 7p14 | REV | TRG | M14997 | EX2 | 25..72 | sense | 38268297..38268344 | NT_007819.16 | 37790730..37790777 | -1 | 38268297..38268344 | AC006033.2.1.171816 | 83070..83117 | -1 | |||
TRGC1 | 7p14 | REV | TRG | M14996 | EX1 | 41..370 | sense | 38271475..38271804 | NT_007819.16 | 37793908..37794237 | -1 | 38271475..38271804 | AC006033.2.1.171816 | 86248..86577 | -1 | |||
TRGJ1 | 7p14 | REV | TRG | 104346..104423 | M12961 | J-RS+J-REGION | 129..206 | sense | 38275617..38275694 | NT_007819.16 | 37798050..37798127 | -1 | 38275617..38275694 | AC006033.2.1.171816 | 90390..90467 | -1 | ||
TRGJP | 7p14 | REV | TRG | 100238..100327 | M12950 | J-RS+J-REGION | 1..90 | sense | 38279713..38279802 | NT_007819.16 | 37802146..37802235 | -1 | 38279713..38279802 | AC006033.2.1.171816 | 94486..94575 | -1 | ||
TRGJP1 | 7p14 | REV | TRG | 97568..97655 | X08084 | J-RS+J-REGION | 1..88 | sense | 38282385..38282472 | NT_007819.16 | 37804818..37804905 | -1 | 38282385..38282472 | AC006033.2.1.171816 | 97158..97245 | -1 | ||
TRGV11 | 7p14 | REV | TRG | 81836..82337 | Y11227 | L-PART1+V-INTRON+V-EXON+V-RS | 1..502 | sense | 38297703..38298204 | NT_007819.16 | 37820136..37820637 | -1 | 38297703..38298204 | AC006033.2.1.171816 | 112476..112977 | -1 | ||
TRGVB | 7p14 | REV | TRG | 77681..78190 | X07209 | L-PART1+V-INTRON+V-EXON | 1..471 | sense | 38301889..38302359 | NT_007819.16 | 37824322..37824792 | -1 | 38301889..38302359 | AC006033.2.1.171816 | 116662..117132 | -1 | ||
TRGV10 | 7p14 | REV | TRG | 73632..74141 | X07206 | L-PART1+V-INTRON+V-EXON+V-RS | 1..513 | sense | 38305897..38306406 | NT_007819.16 | 37828330..37828839 | -1 | 38305897..38306406 | AC006033.2.1.171816 | 120670..121179 | -1 | ||
TRGV9 | 7p14 | REV | TRG | 56447..56962 | X07205 | L-PART1+V-INTRON+V-EXON+V-RS | 7..522 | sense | 38323104..38323618 | NT_007819.16 | 37845537..37846051 | -1 | 38323104..38323618 | AC006033.2.1.171816 | 137877..138391 | -1 | ||
TRGVA | 7p14 | REV | TRG | 51077..51533 | X07208 | L-PART1+V-INTRON+V-EXON+V-RS | 1..457 | sense | 38328533..38328989 | NT_007819.16 | 37850966..37851422 | -1 | 38328533..38328989 | AC006033.2.1.171816 | 143306..143762 | -1 | ||
TRGV8 | 7p14 | REV | TRG | 43134..43651 | M13434 | L-PART1+V-INTRON+V-EXON+V-RS | 1..518 | sense | 38336430..38336947 | NT_007819.16 | 37858863..37859380 | -1 | 38336430..38336947 | AC006033.2.1.171816 | 151203..151720 | -1 | ||
TRGV7 | 7p14 | REV | TRG | 38443..38955 | M13433 | V-INTRON+V-EXON | 1..370 | sense | 38341167..38341537 | NT_007819.16 | 37863600..37863970 | -1 | 38341167..38341537 | AC006033.2.1.171816 | 155940..156310 | -1 | ||
TRGV6 | 7p14 | REV | TRG | 32787..33297 | M13432 | L-PART1+V-INTRON+V-EXON | 1..472 | sense | 38346826..38347297 | NT_007819.16 | 37869259..37869730 | -1 | 38346826..38347297 | AC006033.2.1.171816 | 161599..162070 | -1 | ||
TRGV5P | 7p14 | REV | TRG | 28453..28961 | M13431 | L-PART1+V-INTRON+V-EXON | 1..470 | sense | 38351156..38351625 | NT_007819.16 | 37873589..37874058 | -1 | 38351156..38351625 | AC006033.2.1.171816 | 165929..166398 | -1 | ||
TRGV5 | 7p14 | REV | TRG | 24128..24636 | X13355 | L-PART1+V-INTRON+V-EXON+V-RS | 1..509 | sense | 38355442..38355950 | NT_007819.16 | 37877875..37878383 | -1 | 38355442..38355950 | AC006033.2.1.171816 | 170215..170723 | -1 | ||
TRGV4 | 7p14 | REV | TRG | 19769..20276 | X15272 | L-PART1+V-INTRON+V-EXON+V-RS | 237..744 | sense | 38359802..38360309 | NT_007819.16 | 37882235..37882742 | -1 | 38359802..38360309 | AC007245.3.1.133137 | 2959..3466 | -1 | ||
TRGV3 | 7p14 | REV | TRG | 14972..15478 | M13430 | L-PART1+V-INTRON+V-EXON+V-RS | 1..507 | sense | 38364599..38365105 | NT_007819.16 | 37887032..37887538 | -1 | 38364599..38365105 | AC007245.3.1.133137 | 7756..8262 | -1 | ||
TRGV2 | 7p14 | REV | TRG | 10623..11126 | M13429 | L-PART1+V-INTRON+V-EXON+V-RS | 1..504 | sense | 38368951..38369454 | NT_007819.16 | 37891384..37891887 | -1 | 38368951..38369454 | AC007245.3.1.133137 | 12108..12611 | -1 | ||
TRGV1 | 7p14 | REV | TRG | 5892..6386 | M12949 | L-PART1+V-INTRON+V-EXON+V-RS | 1..495 | sense | 38373687..38374181 | NT_007819.16 | 37896120..37896614 | -1 | 38373687..38374181 | AC007245.3.1.133137 | 16844..17338 | -1 |