IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

**Provisional nomenclature (scaffolds only, no chromosome assembly).**
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	IMGT/LIGM-DB locus reference sequences							IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Isolate	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers		Isolate	Clone names	Accession numbers	Positions in the sequence
TRAC	TRAC	TRAC*01	F						MEF-2018	RPGA01000024.1	EX1		IMGT000071	1748531..1748803
											EX2		IMGT000071	1749518..1749562
											EX3		IMGT000071	1750356..1750463
											EX4UTR	(1)	IMGT0000071	1751081..1751608

IMGT notes:

(1) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles

More information:

See also (IMGT Scientific chart):

Created:: 07/07/2021
Last updated:: 22/09/2023
Authors:: Maria Georga

IMGT Repertoire (IG and TR)

Gene table: Naked mole-rat (Heterocephalus glaber) TRAC