IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

The IGLC1 gene is not yet available because the genome assembly is in progress.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	IMGT/LIGM-DB reference sequences					IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Positions in the locus	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Clone names		Accession numbers	Positions in the sequence
	IGLC2	IGLC2*01	F	14q16-q21						CH242-141B5		CU467669	[1]			CH242-524K4	CU467599	[1]
	IGLC3	IGLC3*01	F	14q16-q21						CH242-524K4		CU467599	[1]

IMGT references:

[1] Schwartz J.C. et al., Immunogenetics, 64, 399-407 (2012). PMID:22186825

See also (IMGT Scientific chart):

Created:: 24/07/2013
Last updated:: 22/09/2023
Authors:: Emilie Carillon

IMGT Repertoire (IG and TR)

Gene table: pig (Sus scrofa) IGLC