IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
R: Rearranged
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT subgroup	IMGT gene name	IMGT allele name	Fct	Chromosomal localization	R	T	Pr	IMGT/LIGM-DB locus reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT subgroup	IMGT gene name	IMGT allele name	Fct	Chromosomal localization	R	T	Pr	Isolate	Clone names	Accession numbers	Positions in the sequence (J-GENE-UNIT)	Secondary accession numbers		Isolate	Clone names	Accession numbers	Positions in the sequence (J-GENE-UNIT)
IGKJ1	IGKJ1	IGKJ1*01	F		2A				Kamilah	CM017848.1		IMGT000077	MAP	878254..878330			LT578338.1	IMGT000089	MAP	683620..683696
																KB3781	CM054583.1	IMGT000137	MAP	1359025..1359101
																KB3781	CM054559.1	IMGT000138	MAP	878969..879045
IGKJ2	IGKJ2	IGKJ2*01	F		2A				Kamilah	CM017848.1		IMGT000077	MAP	878614..878691			LT578338.1	IMGT000089	MAP	683980..684057
																KB3781	CM054583.1	IMGT000137	MAP	1359385..1359462
																KB3781	CM054559.1	IMGT000138	MAP	879329..879406
IGKJ3	IGKJ3	IGKJ3*01	F		2A				Kamilah	CM017848.1		IMGT000077	MAP	878920..878995			LT578338.1	IMGT000089	MAP	684286..684361
																KB3781	CM054583.1	IMGT000137	MAP	1359691..1359766
																KB3781	CM054559.1	IMGT000138	MAP	879635..879710
IGKJ4	IGKJ4	IGKJ4*01	F		2A				Kamilah	CM017848.1		IMGT000077	MAP	879254..879330			LT578338.1	IMGT000089	MAP	684620..684696
																KB3781	CM054583.1	IMGT000137	MAP	1360025..1360101
																KB3781	CM054559.1	IMGT000138	MAP	879969..880045
IGKJ5	IGKJ5	IGKJ5*01	F		2A				Kamilah	CM017848.1		IMGT000077	MAP	879572..879648		KB3781	CM054583.1	IMGT000137	MAP	1360343..1360419
IGKJ5	IGKJ5	IGKJ5*02	F		2A					LT578338.1		IMGT000089	MAP	684938..685014		KB3781	CM054559.1	IMGT000138	MAP	880287..880363

MAP: mapped sequences.

More information:

See also (IMGT Scientific chart):

Created:: 28/04/2022
Last updated:: 22/09/2023
Authors:: Chahrazed Debbagh

IMGT Repertoire (IG and TR)

Gene table: Western lowland gorilla (Gorilla gorilla gorilla) IGKJ