IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization		T	Pr	IMGT/LIGM-DB locus reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization		T	Pr	Isolate	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Breed		Clone names	Accession numbers	Positions in the sequence
	TRGC1	TRGC1*01	F				7			Kamilah	CM017854.1	EX1	IMGT000102	MAP	109378..109707
												EX2	IMGT000102	MAP	112840..112887
												EX3	IMGT000102	MAP	114825..114964
		TRGC1*02	P	(1)			7				LT578344.1	EX1	IMGT000103	MAP	114454..114782
												EX2	IMGT000103	MAP	117918..117965
												EX3	IMGT000103	MAP	119904..120043
	TRGC2	TRGC2*01	F				7			Kamilah	CM017854.1	EX1	IMGT000102	MAP	125503..125832
												EX2T	IMGT000102	MAP	129839..129886
												EX2R	IMGT000102	MAP	132568..132615
												EX2	IMGT000102	MAP	135336..135383
												EX3	IMGT000102	MAP	137309..137448
		TRGC2*02	P	(2)			7				LT578344.1	EX1	IMGT000103	MAP	130579..130908
												EX2T	IMGT000103	MAP	134913..134960
												EX2R	IMGT000103	MAP	137641..137688
												EX2	IMGT000103	MAP	140415..140461
												EX3	IMGT000103	MAP	142386..142525

MAP: mapped sequences.

IMGT notes:

(1) frameshift in EX1: deletion of 1 nt
(2) frameshift in EX2: deletion of 1 nt

More information:

See also (IMGT Scientific chart):

Created:: 26/04/2022
Last updated:: 22/09/2023
Authors:: Joanna Maria Rosinska, Chahrazed Debbagh

IMGT Repertoire (IG and TR)

Gene table: Western lowland gorilla (Gorilla gorilla gorilla) TRGC