IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
R: Rearranged
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	R	T	Pr	IMGT/LIGM-DB locus reference sequences					IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	R	T	Pr	Breed	Clone names	Accession numbers	Positions in the sequence (J-GENE-UNIT)	Secondary accession numbers	Breed		Clone names	Accession numbers	Positions in the sequence (J-GENE-UNIT)
	IGKJ1	IGKJ1*01	F		A3	+	+		Abyssinian	CM001380.3		IMGT000050	MAP	146213..146289
	IGKJ2	IGKJ2*01	F		A3	+	+		Abyssinian	CM001380.3		IMGT000050	MAP	146578..146655
	IGKJ3	IGKJ3*01	F		A3	+	+		Abyssinian	CM001380.3		IMGT000050	MAP	146900..146975
	IGKJ4	IGKJ4*01	F		A3	+	+		Abyssinian	CM001380.3		IMGT000050	MAP	147233..147309
	IGKJ5	IGKJ5*01	F		A3	+	+		Abyssinian	CM001380.3		IMGT000050	MAP	147548..147624

MAP: Mapped reference sequences.

More information:

See also (IMGT Scientific chart):

Created:: 24/07/2019
Last updated:: 22/09/2023
Authors:: Perrine Pégorier

IMGT Repertoire (IG and TR)

Gene table: domestic cat (Felis catus) IGKJ