Chimpanzee (Pan troglodytes) TRB locus on chromosome 6 assembly NHGRI_mPanTro3-v2.1_pri (isolate AG18354)

The orientation of the chimpanzee (Pan troglodytes) TRB locus on chromosome 6 assembly NHGRI_mPanTro3-v2.1_pri (isolate AG18354) is forward (FWD).

Legend:
Colors are according to IMGT color menu for genes.
The boxes representing the genes are not to scale. Exons are not shown.
A double slash // indicates a gap in genome assembly. Distances in bp (base pair) or in kb (kilobase) associated with a double slash are taken into account in the length of the lines and included in the numbers displayed at the right end of the lines.

Horizontal arrows show genes whose polarity is opposite to that of the locus.

• MOXD2 (monooxygenase DBH like 2) (5' borne) has been identified 60 kb upstream of TRBV1 (P), the most 5' gene in the locus
• EPHB6 (EPH receptor B6) (3' borne) has been identified 40 kb downstream of TRBV30 (F), the most 3' gene in the locus.

Locus representation with only the functional genes: chimpanzee (Pan troglodytes) TRB locus on chromosome 6 assembly NHGRI_mPanTro3-v2.1_pri (isolate AG18354)

* When needed, indicate the presence of allele(s) with another functionality: see above chimpanzee (Pan troglodytes) TRB locus on chromosome 6 assembly NHGRI_mPanTro3-v2.1_pri (isolate AG18354)

Zoom for (isolate AG18354) D-J-C-CLUSTER

• Gene table: chimpanzee (Pan troglodytes) TRBV
• Gene table: chimpanzee (Pan troglodytes) TRBD
• Gene table: chimpanzee (Pan troglodytes) TRBJ
• Gene table: chimpanzee (Pan troglodytes) TRBC
• Potential germline repertoire: chimpanzee (Pan troglodytes) TRBV, TRBD and TRBJ genes on chromosome 6

• Genomic orientation (IMGT Index)
• Taxonomy: Eutheria