IMGT Repertoire (IG and TR)

Rabbit (Oryctolagus cuniculus) TRB locus

Legend:
Colors are according to IMGT color menu for genes.
The boxes representing the genes are not to scale. Exons are not shown.
A double slash // indicates a gap in genome assembly. Distances in bp (base pair) or in kb (kilobase) associated with a double slash are taken into account in the length of the lines and included in the numbers displayed at the right end of the lines.
A dotted line ... indicates the distance in kb (kilobase) between the locus and its bornes (5' borne and the most 5' gene in the locus and/or 3' borne and the most 3' gene in the locus) on the top and bottom lines, respectively. These distances are not represented at scale and are not included in the numbers displayed at the right ends of these two lines.

TRB gene names are according to the IMGT nomenclature [1].
Single arrows show genes whose polarity is opposite to that of the D-J-C-CLUSTER comprising TRBD1-TRBJ (J1-1 to J1-6)-TRBC1-TRBD2-TRBJ (J2-1 to J2-6)-TRBC2.

The rabbit (Oryctolagus cuniculus) Locus representation is Fig. 4 modified from: R. Antonacci, F. Giannico, S. Ciccarese, S. Massari.
Genomic characteristics of the T cell receptor (TRB) locus in the rabbit (Oryctolagus cuniculus) revealed by comparative and phylogenetic analyses.
Immunogenetics. 66:255-266 (2014). doi: 10.1007/s00251-013-0754-1. PMID: 24500788

The original figure was kindly provided by Salvatrice Ciccarese with permission from Springer.

Zoom for TRB D-J-C-CLUSTER

• Gene table: rabbit (Oryctolagus cuniculus) TRBV
• Gene table: rabbit (Oryctolagus cuniculus) TRBD
• Gene table: rabbit (Oryctolagus cuniculus) TRBJ
• Gene table: rabbit (Oryctolagus cuniculus) TRBC
• Potential germline repertoire: rabbit (Oryctolagus cuniculus) TRBV, TRBD and TRBJ genes

• Genomic orientation (IMGT Index)
• Taxonomy: Eutheria