IMGT Repertoire (IG and TR)
Locus in genome assembly: house mouse (Mus Musculus) IGK locus
House mouse (Mus Musculus) IGK locus
| IMGT locus | IGK locus | IGK locus | IGK locus | IGK locus |
|---|---|---|---|---|
| IMGT locus ID: Musmus_IGK_1 | IMGT locus ID: Musmus_IGK_2 | IMGT locus ID: Musmus_IGK_3 | IMGT locus ID: Musmus_IGK_4 | |
| Taxonomy | Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
Mus musculus (House mouse), taxon: 10090 |
| Strain: C57BL/6J | Strain: BALB/cJ | Strain: DBA/2J | Strain: 129S1/SvImJ | |
| Genome assembly | GRCm38.p6 | BALB_cJ_v3 | DBA_2J_v3 | 129S1_SvImJ_v3 |
| GenBank assembly ID | GCA_000001635.8 | GCA_921997145.2 | GCA_921998315.2 | GCA_921998555.2 |
| RefSeq assembly ID | GCF_000001635.26 | |||
| BAC library | ||||
| Chromosome | 6 | 6 | 6 | 6 |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM000999.2 (67545636..70736754) | OW971641.1 (64537138..67733842) | OW971810.1 (64897813..68091673) | OW971724.1 (64432229..67616797) |
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_000072.6 (67545636..70736754) | |||
| IMGT locus orientation on the chromosome | FWD | FWD | FWD | FWD |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000068 | IMGT000123 | IMGT000125 | IMGT000127 |
| IMGT/LIGM-DB locus reference sequence length (bp) | 3191119 | 3196705 | 3193861 | 3184569 |
More information:
- Created:
- 27/03/2026
- Last updated:
- 21/04/2026
- Authors:
- Ifigeneia Sideri, Anna Tran, Ariadni Papadaki
