IMGT Repertoire (IG and TR)
Locus in genome assembly: Sumatran orangutan (Pongo abelii) TRA/TRD locus
Sumatran orangutan (Pongo abelii) TRA/TRD locus
| IMGT locus | TRA/TRD locus | TRA/TRD locus |
|---|---|---|
| IMGT locus ID: Ponabe_TRA/TRD_1 | IMGT locus ID: Ponabe_TRA/TRD_2 | |
| Taxonomy | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213 | Pongo abelii (Sumatran orangutan), taxon:9601, isolate: AG06213 |
| Genome assembly | NHGRI_mPonAbe1-v2.0_pri | NHGRI_mPonAbe1-v2.0_alt |
| GenBank assembly ID | GCA_028885655.3 | GCA_028885685.2 |
| RefSeq assembly ID | GCF_028885655.2 | |
| BAC library | ||
| Chromosome | 15 | 15 |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM054694.2 (25035979..26084625) | CM054671.2 (17071223-18122370) |
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_072000.2 (25035979..26084625) | |
| IMGT locus orientation on the chromosome | FWD | FWD |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000253 | IMGT000274 |
| IMGT/LIGM-DB locus reference sequence length (bp) | 1048647 | 1051148 |
More information:
- Gene table: Sumatran orangutan (Pongo abelii) TRAV
- Gene table: Sumatran orangutan (Pongo abelii) TRAJ
- Gene table: Sumatran orangutan (Pongo abelii) TRAC
- Gene table: Sumatran orangutan (Pongo abelii) TRDV
- Gene table: Sumatran orangutan (Pongo abelii) TRDD
- Gene table: Sumatran orangutan (Pongo abelii) TRDJ
- Gene table: Sumatran orangutan (Pongo abelii) TRDC
- Potential germline repertoire: Sumatran orangutan (Pongo abelii) TRAV and TRAJ genes on chromosome 15
- Potential germline repertoire: Sumatran orangutan (Pongo abelii) TRDV, TRDD and TRDJ genes on chromosome 15
- Created:
- 26/03/2026
- Last updated:
- 23/04/2026
- Authors:
- Shamsa Batool
