multprocPlot {IMGTStatClonotype}R Documentation

Multiples testing procedures displays

Description

This function draws graphs from multiple testing results. It displays the number of rejected hypotheses plotted against the Type I error rate for each of the procedures and the ordered adjusted p-values plotted for each of the procedures obtained by using the functions mt.plot of the package multtest (plottype: "rvsa" and "pvst" respectively).

Usage

multprocPlot(data, ...)

Arguments

data

the data isssued from the function sigrepDiv or sigrepExp

...

optional parameters

Value

Graphs from multiple testing results.

Source

Gentleman R.C., Carey V.J., Bates D.M., Bolstad B., Dettling M., Dudoit S., et al. (2004) Bioconductor: Open software development for computational biology and bioinformatics R. Genome Biology, Vol. 5, R80, https://www.bioconductor.org/

References

Pollard K.S., Dudoit S., van der Laan M.J. (2005). Multiple testing procedures: R multtest package and applications to genomics. In: Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Gentleman R., Carey V.J., Huber W., Irizarry R.A., Dudoit S. (Eds) Springer (Statistics for Biology and Health Series), pp. 251-272.

Examples


dev.new(width=6.7, height=3.14)
multprocPlot(div)
multprocPlot(exp)


[Package IMGTStatClonotype version 1.0.3 Index]