clonNumExp {IMGTStatClonotype} | R Documentation

## Numbers of IMGT clonotypes (AA) in the two compared sets from the IMGT/HighV-QUEST output for clonotype expression

### Description

This function allows the creation of a matrix containing the number of sequences assigned to IMGT clonotypes (AA) in the two compared sets from the IMGT/HighV-QUEST output with an IMGT gene of a given IMGT V, D or J group (IMGT clonotypes (AA) expression).

### Usage

    clonNumExp(data1, data2)

### Arguments

`data1` | the first set from the IMGT/HighV-QUEST output without CDR3-IMGT outlier lengths issued from the function `clonRem`
`data2` | the second set from the IMGT/HighV-QUEST output without CDR3-IMGT outlier lengths issued from the function `clonRem`

### Value

Matrix with IMGT gene names in rows and numbers of IMGT clonotypes (AA) in columns.

### Examples

     Nexp<-clonNumExp(MID1,MID2)

[Package IMGTStatClonotype version 1.0.3 Index]