IMGT Repertoire (IG and TR)

Potential germline repertoire: Bornean orangutan (Pongo pygmaeus) TRGV and TRGJ genes on chromosome 6

For a comparative repertoire between different assemblies' annotations, see: Bornean orangutan (Pongo pygmaeus) TRG locus gene repertoire per assembly.

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Bornean orangutan (Pongo pygmaeus) TRGV genes

The Bornean orangutan (Pongo pygmaeus) TRG locus on chromosome 6 comprises 15 TRGV genes belonging to 8 TRGV subgroups :

IMGT group	IMGT subgroup	Functional	ORF	Pseudogene	Total
TRGV	TRGV1	6	0	2 (0:2)	8
	TRGV2	1	0	0	1
	TRGV3	0	1	0	1
	TRGV4	0	1	0	1
	TRGVA	0	0	1(1:0)	1
	TRGVB	0	0	1 (0:1)	1
	TRGVC	0	0	1 (1:0)	1
	TRGVD	0	0	1 (1:0)	1
Total		7	2	6	15

In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.

Bornean orangutan (Pongo pygmaeus) TRGJ genes

The Bornean orangutan (Pongo pygmaeus) TRG locus on chromosome 6 comprises 5 TRGJ genes belonging to 2 sets:

IMGT group	IMGT set or subgroup (if any)	Functional	ORF	Total
TRGJ	TRGJ1	2	1	3
TRGJ	TRGJ2	1	1	2
Total		3	2	5

In the column 'Pseudogene', the number of pseudogenes with V-REGION in-frame and the number of pseudogenes with frameshift(s) are shown separated by two dots, between parentheses.

More information:
Gene table: Bornean orangutan (Pongo pygmaeus) TRGV
Gene table: Bornean orangutan (Pongo pygmaeus) TRGJ
Locus description: Bornean orangutan (Pongo pygmaeus) TRG