V-REGION sequence logos

Sequences for generating the V-REGION sequence logos are from IMGT domain reference directory [1] (translation from IMGT/GENE-DB [2]).
They comprise only allele *01 of functional and non partial V-REGION sequences.

V-REGION sequence logos were generated using Weblogo [3].

domain
domain

up

V-REGION sequence logos for the seven loci

Sequences for generating the V-REGION sequence logos are from IMGT domain reference directory [1] (translation from IMGT/GENE-DB [2]).
They comprise only allele *01 of functional and non partial V-REGION sequences.

V-REGION sequence logos were generated using Weblogo [3].

domain
IGHV
IGKV
IGLV
IGV
TRAV
TRBV
TRGV
TRDV
(1)
TRV
 7
loci
(1)
7V

up

Number of sequences for generating the V-REGION sequence logos for the seven loci

Sequences for generating the V-REGION sequence logos are from IMGT domain reference directory [1] (translation from IMGT/GENE-DB [2]).
They comprise only allele *01 of functional and non partial V-REGION sequences.

V-REGION
IGH 178
IGK 110
IGL 2
TRA 84
TRB 22
TRG 7
TRD 6
Total 409

up

IMGT notes:
(1) The position 84A occupied in only one TRAV sequence (TRAV4-4/DV10*01) by an arginine (R) is not shown.
IMGT references:
[1] Kaas, Q. et al. Nucleic Acids Res., 32, D208 - D210 (2004). PMID: 14681396 LIGM:281 pdf
[2] Giudicelli, V. et al. Nucleic Acids Res., Jan 2005; 33: D256 - D261. PMID: 15608191 LIGM:292 pdf
[3] Crooks G. E. et al. Genome Research, 14, 1188-1190 (2004). PMID: 15173120