Alignment of alleles: Goat (Capra hircus) TRBV13S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               D   T   E   V   T   Q   R   P   S   H   L   I   K   G   K   D   Q   K   A   K
  U59407  ,TRBV13S1*01        GAC ACT GAG GTC ACC CAG AGA CCA AGT CAT CTG ATC AAA GGA AAA GAC CAG AAA GCA AAG

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               M   D   C   V   P   K   E   G   H   P   Y                               V   Y
  U59407  ,TRBV13S1*01        ATG GAT TGT GTT CCC AAA GAA GGA CAT CCT TAC ... ... ... ... ... ... ... GTT TAC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   R   K   K   L   E   G   A   F   E   F   L   V   Y   F   Q   N   Q   D
  U59407  ,TRBV13S1*01        TGG TAT CGC AAG AAG TTG GAA GGA GCA TTT GAG TTT TTG GTT TAC TTT CAG AAT CAA GAC

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               T                   M   E   D   T   V   E   F   K   Q   R   F   S   A   E   C
  U59407  ,TRBV13S1*01        ACT ... ... ... ... ATG GAA GAT ACA GTC GAG TTC AAA CAG CGA TTT TCA GCT GAA TGC


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               H       Q   N   S   P   C   S   L   E   I   K   S   T   E   P   A   D   S   A
  U59407  ,TRBV13S1*01        CAC ... CAA AAC TCA CCC TGC AGT CTG GAA ATC AAG TCC ACC GAG CCA GCG GAC TCG GCT

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107 108
                               L   Y   F   C   A   S   S   P
  U59407  ,TRBV13S1*01        CTG TAT TTC TGT GCC AGC AGC CCG    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch