Alignment of alleles: Goldfish (Carassius auratus) IGHV2S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 G   Q   S   L   T   S   S   D   S       V   V   K   K   P   G   E   S   V   T
  X61312  ,IGHV2S1*01           GGT CAG TCT TTG ACC TCC TCA GAT TCT ... GTG GTG AAA AAG CCT GGA GAA TCA GTG ACT

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   S   C   T   A   S   G   F   S   M   S   S   Y   W                   M   G
  X61312  ,IGHV2S1*01           CTG TCC TGC ACT GCT TCT GGA TTC TCA ATG AGC AGC TAC TGG ... ... ... ... ATG GGC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   I   R   Q   K   P   G   K   A   L   E   W   I   G   Q   I   S   G   S   T
  X61312  ,IGHV2S1*01           TGG ATC CGT CAG AAA CCA GGG AAA GCA CTG GAG TGG ATT GGA CAG ATA TCT GGC TCA ACT

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 V                   Y   Y   A   Q   S   L   Q       G   Q   F   S   I   T   T
  X61312  ,IGHV2S1*01           GTG ... ... ... ... TAT TAT GCT CAG TCT CTA CAG ... GGA CAG TTC TCC ATC ACC ACA


                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 D   T   S   K   N   M   L   H   L   E   V   K   S   L   K   T   E   D   T   A
  X61312  ,IGHV2S1*01           GAC ACC AGC AAA AAC ATG CTG CAT TTA GAG GTG AAG AGC CTG AAG ACT GAA GAC ACA GCT

                                                _CDRCDR3-IMGT__
                                101 102 103 104 105 106 107
                                 V   Y   Y   C   A   R   D
  X61312  ,IGHV2S1*01           GTT TAT TAC TGT GCA AGA GAC T

This alignement has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 02/07/2003
Author: Nathalie Bosc