Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization		 R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)		 Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRDJ1 TRDJ1 TRDJ1*01 F MEF-2018 RPGA01000024.1 IMGT000071 869128..869206
TRDJ2 TRDJ2 TRDJ2*01 ORF (1) MEF-2018 RPGA01000024.1 IMGT000071 875718..875799
TRDJ3 TRDJ3 TRDJ3*01 P (2) MEF-2018 RPGA01000024.1 IMGT000071 878096..878182
TRDJ4 TRDJ4 TRDJ4*01 ORF (3) MEF-2018 RPGA01000024.1 IMGT000071 874284..874359

Provisional nomenclature (scaffolds only, no chromosome assembly).
IMGT notes:
  1. (1) noncanonical J-HEPTAMER
  2. (2) frameshift in J-REGION
  3. (3) noncanonical J-NONAMER, noncanonical DONOR-SPLICE
Created:
07/07/2021
Last updated:
22/09/2023
Authors:
Maria Georga