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IMGT reference sequences in FASTA format:

Nucleotide sequences without gaps

The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is) 
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX1|
atgaatatgcccaacgaacgcctcaaatggctaatgctgttcgcagctgttgccctcatt
g
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX2|[D1]|C-LIKE|
cttgtggtagtcagaccctagctgccaatcccccagatgccgaccaaaaaggacccgtct
tcctcaaggaacccaccaaccgcattgacttctccaactccacgggcgcagagatcgagt
gcaaggccagcggcaatcccatgcccgagattatttggatcaggagcgacggtaccgccg
tgggtgatgtgcccggattgcgtcagatctcatccgacggcaagctggtcttccctccat
tccgcgccgaggactaccgccaggaggtccatgcccaggtgtacgcctgcctggcccgca
accagttcggatccattatctcccgggacgtccatgtgcgagccg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX3|[D2]|C-LIKE|
tcgtttcacagttctacataaccgaggccgagaatgagtacgtaattaaagggaacgcgg
cggtggtcaagtgtaagatcccatccttcgtggccgatttcgtgcaggttgaggcctggg
tggacgaggagggcatggagttgtggcgcaacaatgccaccgacgcctatg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX4|[D2]|C-LIKE|
atggaaagtacctggtattgccctctggagagctgcacatccgtgaggttggacccgagg
acggatacaagagctaccagtgccgaaccaaacatcgtctgaccggagaaacccgattaa
gtgccacaaaaggacgattggtcatcacag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX5|[D3]|C-LIKE|
agcccgttagcagtagtccgcccaaaatcaatgctctgacctataagcccaatattgtgg
agtccatggcgtccaccgcaatactttgtcccgcccaaggctatccagctcctagtttta
g
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX6|[D3,D4,D5,D6]|C-LIKE|
atggtacaagttcatcgaaggaacaacccgtaaacaagctgtggtgctaaatgaccgtgt
gaagcaggtctctggtactctcattattaaggacgcagtagtcgaggactccggaaaata
cctgtgcgtggtgaacaattccgtgggaggcgaaagcgttgagactgtgcttaccgtcac
tgcccccctatccgctaagatcgatcctcccacacagacagttgacttcggacgccccgc
cgtattcacttgccagtacactggaaatcccatcaagaccgttagctggatgaaggacgg
caaggctatcggacacagcgaacccgtgctgcgcatcgaatccgtgaagaaggaggacaa
gggcatgtaccagtgcttcgtaagaaacgaccaggaatcggcggaggcgagtgctgagct
gaagctcggaggccgtttcgatccccccgtcatccgacaggccttccaggaagagaccat
ggaacccggaccaagtgtattcctcaagtgcgtcgccggcggaaaccccacgcccgaaat
ttcctgggaactcgacggcaagaaaatcgccaacaacgatcgctatcaggtcggacagta
tgtgacggtcaacggagatgtggtttcctatctgaacataacctcggtccacgccaacga
tggcggtctctacaagtgcatagccaagagcaaagtgggcgtggccgaacactcggccaa
gttgaatgtatatggactgccctacatccggcaaatggagaagaaggcaattgttgctgg
agaaaccctgattgtcacatgtcctgtagctggataccccatcgattcgattgtctggga
gcgag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX7|[D6]|C-LIKE|
ataaccgtgccctgcccatcaaccgcaaacagaaggtcttccccaacggaacgctgatta
tcgagaatgtggaacggaactcagaccaagcgacctacacttgcgttgccaagaatcagg
aaggatactctgctcgaggatctctggaagtgcaagtcatgg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX8|[D7]|C-LIKE|
tgccgccccaggttttgccctttagtttcggtgaatccgccgccgatgtcggcgatattg
ccagtgccaactgtgtggtgcccaagggagatctgcccctggagattcgctggtccctca
actctgctccaatcgtaaacggcgaaaatgggtttaccctggtgcgtctgaataagcgca
cgagtctgttaaacattgattctctaaatgcttttcatcgcggtgtctacaagtgcatag
ccacaaatccggctgggaccagtgaatatgtagctgaattacaagttaatg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX9|[D8]|C-LIKE|
tacctcccagatggatcctcgagcccaccgataaggccttcgcccagggatccgatgcca
aggttgaatgcaaggctgatggcttccccaaaccccaagttacatggaagaaagcagttg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX10|[D8,D9]|C-LIKE|[D10,D11,D12]|F-LIKE|
gcgacacccccggagagtacaaggatctaaagaagagcgacaacatccgcgtggaagagg
gcactctgcatgtcgacaacatccaaaagaccaacgagggctactatctgtgcgaggcta
tcaatggaataggctccggcctctcggctgtgattatgatcagcgttcaggcccctccag
agttcacggagaagctgcgcaaccagaccgcccgacgaggagaacccgccgtactccagt
gcgaggcgaagggcgagaagcccattggcatcttgtggaacatgaacaacatgcgactgg
acccaaagaacgacaatcggtacaccattcgtgaggagatcctttccaccggagttatgt
ccagtctgtcgatcaagcgcaccgagagatccgactccgccctattcacctgtgtcgcca
ctaatgcctttggatccgatgacgccagcataaatatgattgtccaggaagttccggaga
tgccatatgctttgaaggtactcgacaaatccggacgttccgtgcagctgagctgggcgc
aaccctacgatggcaactcccctctggacaggtacatcattgagtttaagcgttctcgtg
cctcctggagcgaaattgatcgcgtcatcgtgcccggacacaccacagaagcccaagtgc
agaagctcagccccgccaccacctacaacattcgcatcgtggccgaaaacgccatcggca
catcccaatcctctgaagcggtcactatcatcacagccgaagaagcaccctccggcaagc
cccagaacatcaaggtagaacccgtgaaccagaccaccatgcgcgtcacctggaagccac
caccacgcaccgagtggaacggagagatcctgggctactacgtcggctacaagctatcca
acactaactcgtcctacgttttcgagaccatcaacttcatcaccgaggagggcaaggagc
acaacctggaactgcagaacctgcgcgtgtacacccagtactccgtggtgatccaggcct
tcaacaagatcggagctggtccactgagcgaagaggagaaacaattcacggccgagggaa
cgcccagccagccacccagtgacaccgcctgcaccaccttaacttcgcagaccattcgcg
tcggatgggtgagcccacccctggaatccgccaacggagtgatcaagacctataaggttg
tctatgcccccagtgacgagtggtatg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX11|[D12]|F-LIKE|
acgagaccaagcgacactataagaagacggcctcctccgacacagtcctccatggcttaa
agaagtacaccaactacacaatgcaggtcctggccacaacagccggaggcgatggcgtcc
gcagcgttcccatccactgccaaaccgaacccgatg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX12|[D13],[D15]|F-LIKE|[D14]|C-LIKE|
ttcccgaagcacccactgatgtaaaggctcttgttatgggtaacgccgctatcctggtat
cctggcgcccaccagcacagccaaacggcattatcacccagtacaccgtgtactccaagg
ccgaaggcgctgagactgagacaaagacccagaaggttccccactaccagatgagtttcg
aggccaccgaactggagaagaacaagccctacgagttctgggtgacagctagcaccacca
ttggcgaaggccagcagtctaagagcatagtggccatgcccagcgaccaggtgcccgcca
agatcgcctccttcgacgacaccttcactgccaccttcaaggaggacgccaagatgccct
gcctggccgttggagccccccaacccgagatcacatggaagatcaagggcgtcgaattca
gtgccaacgatcgcatgcgcgtcctccccgacggatcgctgctgatcaagtcggtaaatc
gccaggatgccggagactactcctgccacgccgagaactcgattgctaaggactccatca
cgcacaaactgattgttctggcaccaccacaatcgccccacgtcaccctctcggcaacca
ccactgatgccctgactgtaaagttgaagccccatgagggagacactgctcctctgcatg
gatacaccctgcactacaagccag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX13|[D15]|F-LIKE|
aattcggagaatgggaaacatcggaagtgtctgtcgactcacagaagcacaacatcgaag
gtctcttgtgcggctcccgctatcaggtctatgccacaggattcaataa
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX14|[D16]|F-LIKE|
cattggagctggcgaagcttctgacattttgaacacccggaccaagggacagaagcccaa
gctgcccgagaaacctcgcttcattgaagtgtcgtccaactcggtgtccctgcacttcaa
ggcctggaaagatggaggatgccccatgtcgcactttgtggtggagagcaagaagcg
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX15|[D16]|F-LIKE|
cgatcaaattgagtggaaccaaatttcgaacaacgtgaagcccgataacaactacgtggt
tttggacctggaacccgccacctggtacaacctccgcatcactgcccacaactcggctgg
cttcactgtggccgaatacgactttgccaccttaaccgttaccggag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX16|[CO+TM+CY]|
gcactatcgcaccctcgcgagatttacccgagttaagcgccgaggacacgatccgcatta
tcctctcgaacctaaacttagttgtgcccgtcgtggcggctctgctcgtcataatcatag
cgataattgttatttgtatactgcgtagcaagggcaatcaccacaaag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX17|[CY]|
acgatgtagtttacaatcagacaatgggacccggcgccaccctggacaagcgtcgtccgg
acctgcgggatgagctcggatacatcgccccgcccaaccggaagctgccccccgttcccg
gatccaactataatacctgtgaccggattaagcgag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX18|[CY]|
gccgcggtggcctccggtccaaccactcgacctgggaccctcgacgcaatcccaacctgt
acgaggagctgaaggccccgccagtgccgatgcacggcaaccattacggccacgcccacg
gcaatgccgagtgccactacaggcatccag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX19|[CY]|
gcatggaagatgaaatctgcccctatgccacgttccacctgctcggattccgcgaggaaa
tggaccctaccaaggccatgaacttccagaccttcccccaccagaacggacacgccggcc
cagttcccggacacgcgggcactatgcttccaccaggacatccaggacacgtgcactccc
gctccggatcgcaatcgatgcctcgggccaatcgataccagcgaaagaacagccagggcg
gacagtcctcaatctacacgccagctcccgaatacgatgatcccgccaactgtgccgaag
aggaccaatat
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX20|[CY]|
cgtcgatacacccgcgtcaactcgcaaggcggtagcctgtactccggacccggacccgaa
tacgacgatcccgccaactgcgcacccgaagaggatcagtacggctcccagtacggagga
ccctatggacagccctatgatcactacggttcccggggatccatgggacgtcgtagcatc
g
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX21|[CY]|
gctctgctcgcaatcctggcaatggatcacccgagcctccaccaccaccaccacgcaacc
acgacatgagcaactcctcattcaacgactccaaggagagtaatgagatctcagaggcag
agtgcgatcgtgaccacggaccacgcggaaactacggag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX22|[CY]|
cagtgaagcgatctccacaaccgaaagatcagcgcaccaccgaagaaatgcgcaaactga
tagaaag
>AE003841|DSCAM*01|Drosophila melanogaster|F|EX23|[CY]|
aaacgaaaccggcccaaaacaactccaactccaacaagcaaatggcgcaggattcacagc
ctacgatactatggcagtg
>DSCAM*01|Drosophila melanogaster|F|EX1-23|Splicing 12|
atgaatatgcccaacgaacgcctcaaatggctaatgctgttcgcagctgttgccctcatt
gcttgtggtagtcagaccctagctgccaatcccccagatgccgaccaaaaaggacccgtc
ttcctcaaggaacccaccaaccgcattgacttctccaactccacgggcgcagagatcgag
tgcaaggccagcggcaatcccatgcccgagattatttggatcaggagcgacggtaccgcc
gtgggtgatgtgcccggattgcgtcagatctcatccgacggcaagctggtcttccctcca
ttccgcgccgaggactaccgccaggaggtccatgcccaggtgtacgcctgcctggcccgc
aaccagttcggatccattatctcccgggacgtccatgtgcgagccgtcgtttcacagttc
tacataaccgaggccgagaatgagtacgtaattaaagggaacgcggcggtggtcaagtgt
aagatcccatccttcgtggccgatttcgtgcaggttgaggcctgggtggacgaggagggc
atggagttgtggcgcaacaatgccaccgacgcctatgatggaaagtacctggtattgccc
tctggagagctgcacatccgtgaggttggacccgaggacggatacaagagctaccagtgc
cgaaccaaacatcgtctgaccggagaaacccgattaagtgccacaaaaggacgattggtc
atcacagagcccgttagcagtagtccgcccaaaatcaatgctctgacctataagcccaat
attgtggagtccatggcgtccaccgcaatactttgtcccgcccaaggctatccagctcct
agttttagatggtacaagttcatcgaaggaacaacccgtaaacaagctgtggtgctaaat
gaccgtgtgaagcaggtctctggtactctcattattaaggacgcagtagtcgaggactcc
ggaaaatacctgtgcgtggtgaacaattccgtgggaggcgaaagcgttgagactgtgctt
accgtcactgcccccctatccgctaagatcgatcctcccacacagacagttgacttcgga
cgccccgccgtattcacttgccagtacactggaaatcccatcaagaccgttagctggatg
aaggacggcaaggctatcggacacagcgaacccgtgctgcgcatcgaatccgtgaagaag
gaggacaagggcatgtaccagtgcttcgtaagaaacgaccaggaatcggcggaggcgagt
gctgagctgaagctcggaggccgtttcgatccccccgtcatccgacaggccttccaggaa
gagaccatggaacccggaccaagtgtattcctcaagtgcgtcgccggcggaaaccccacg
cccgaaatttcctgggaactcgacggcaagaaaatcgccaacaacgatcgctatcaggtc
ggacagtatgtgacggtcaacggagatgtggtttcctatctgaacataacctcggtccac
gccaacgatggcggtctctacaagtgcatagccaagagcaaagtgggcgtggccgaacac
tcggccaagttgaatgtatatggactgccctacatccggcaaatggagaagaaggcaatt
gttgctggagaaaccctgattgtcacatgtcctgtagctggataccccatcgattcgatt
gtctgggagcgagataaccgtgccctgcccatcaaccgcaaacagaaggtcttccccaac
ggaacgctgattatcgagaatgtggaacggaactcagaccaagcgacctacacttgcgtt
gccaagaatcaggaaggatactctgctcgaggatctctggaagtgcaagtcatggtgccg
ccccaggttttgccctttagtttcggtgaatccgccgccgatgtcggcgatattgccagt
gccaactgtgtggtgcccaagggagatctgcccctggagattcgctggtccctcaactct
gctccaatcgtaaacggcgaaaatgggtttaccctggtgcgtctgaataagcgcacgagt
ctgttaaacattgattctctaaatgcttttcatcgcggtgtctacaagtgcatagccaca
aatccggctgggaccagtgaatatgtagctgaattacaagttaatgtacctcccagatgg
atcctcgagcccaccgataaggccttcgcccagggatccgatgccaaggttgaatgcaag
gctgatggcttccccaaaccccaagttacatggaagaaagcagttggcgacacccccgga
gagtacaaggatctaaagaagagcgacaacatccgcgtggaagagggcactctgcatgtc
gacaacatccaaaagaccaacgagggctactatctgtgcgaggctatcaatggaataggc
tccggcctctcggctgtgattatgatcagcgttcaggcccctccagagttcacggagaag
ctgcgcaaccagaccgcccgacgaggagaacccgccgtactccagtgcgaggcgaagggc
gagaagcccattggcatcttgtggaacatgaacaacatgcgactggacccaaagaacgac
aatcggtacaccattcgtgaggagatcctttccaccggagttatgtccagtctgtcgatc
aagcgcaccgagagatccgactccgccctattcacctgtgtcgccactaatgcctttgga
tccgatgacgccagcataaatatgattgtccaggaagttccggagatgccatatgctttg
aaggtactcgacaaatccggacgttccgtgcagctgagctgggcgcaaccctacgatggc
aactcccctctggacaggtacatcattgagtttaagcgttctcgtgcctcctggagcgaa
attgatcgcgtcatcgtgcccggacacaccacagaagcccaagtgcagaagctcagcccc
gccaccacctacaacattcgcatcgtggccgaaaacgccatcggcacatcccaatcctct
gaagcggtcactatcatcacagccgaagaagcaccctccggcaagccccagaacatcaag
gtagaacccgtgaaccagaccaccatgcgcgtcacctggaagccaccaccacgcaccgag
tggaacggagagatcctgggctactacgtcggctacaagctatccaacactaactcgtcc
tacgttttcgagaccatcaacttcatcaccgaggagggcaaggagcacaacctggaactg
cagaacctgcgcgtgtacacccagtactccgtggtgatccaggccttcaacaagatcgga
gctggtccactgagcgaagaggagaaacaattcacggccgagggaacgcccagccagcca
cccagtgacaccgcctgcaccaccttaacttcgcagaccattcgcgtcggatgggtgagc
ccacccctggaatccgccaacggagtgatcaagacctataaggttgtctatgcccccagt
gacgagtggtatgacgagaccaagcgacactataagaagacggcctcctccgacacagtc
ctccatggcttaaagaagtacaccaactacacaatgcaggtcctggccacaacagccgga
ggcgatggcgtccgcagcgttcccatccactgccaaaccgaacccgatgttcccgaagca
cccactgatgtaaaggctcttgttatgggtaacgccgctatcctggtatcctggcgccca
ccagcacagccaaacggcattatcacccagtacaccgtgtactccaaggccgaaggcgct
gagactgagacaaagacccagaaggttccccactaccagatgagtttcgaggccaccgaa
ctggagaagaacaagccctacgagttctgggtgacagctagcaccaccattggcgaaggc
cagcagtctaagagcatagtggccatgcccagcgaccaggtgcccgccaagatcgcctcc
ttcgacgacaccttcactgccaccttcaaggaggacgccaagatgccctgcctggccgtt
ggagccccccaacccgagatcacatggaagatcaagggcgtcgaattcagtgccaacgat
cgcatgcgcgtcctccccgacggatcgctgctgatcaagtcggtaaatcgccaggatgcc
ggagactactcctgccacgccgagaactcgattgctaaggactccatcacgcacaaactg
attgttctggcaccaccacaatcgccccacgtcaccctctcggcaaccaccactgatgcc
ctgactgtaaagttgaagccccatgagggagacactgctcctctgcatggatacaccctg
cactacaagccagaattcggagaatgggaaacatcggaagtgtctgtcgactcacagaag
cacaacatcgaaggtctcttgtgcggctcccgctatcaggtctatgccacaggattcaat
aacattggagctggcgaagcttctgacattttgaacacccggaccaagggacagaagccc
aagctgcccgagaaacctcgcttcattgaagtgtcgtccaactcggtgtccctgcacttc
aaggcctggaaagatggaggatgccccatgtcgcactttgtggtggagagcaagaagcgc
gatcaaattgagtggaaccaaatttcgaacaacgtgaagcccgataacaactacgtggtt
ttggacctggaacccgccacctggtacaacctccgcatcactgcccacaactcggctggc
ttcactgtggccgaatacgactttgccaccttaaccgttaccggaggcactatcgcaccc
tcgcgagatttacccgagttaagcgccgaggacacgatccgcattatcctctcgaaccta
aacttagttgtgcccgtcgtggcggctctgctcgtcataatcatagcgataattgttatt
tgtatactgcgtagcaagggcaatcaccacaaagacgatgtagtttacaatcagacaatg
ggacccggcgccaccctggacaagcgtcgtccggacctgcgggatgagctcggatacatc
gccccgcccaaccggaagctgccccccgttcccggatccaactataatacctgtgaccgg
attaagcgaggccgcggtggcctccggtccaaccactcgacctgggaccctcgacgcaat
cccaacctgtacgaggagctgaaggccccgccagtgccgatgcacggcaaccattacggc
cacgcccacggcaatgccgagtgccactacaggcatccaggcatggaagatgaaatctgc
ccctatgccacgttccacctgctcggattccgcgaggaaatggaccctaccaaggccatg
aacttccagaccttcccccaccagaacggacacgccggcccagttcccggacacgcgggc
actatgcttccaccaggacatccaggacacgtgcactcccgctccggatcgcaatcgatg
cctcgggccaatcgataccagcgaaagaacagccagggcggacagtcctcaatctacacg
ccagctcccgaatacgatgatcccgccaactgtgccgaagaggaccaatatcgtcgatac
acccgcgtcaactcgcaaggcggtagcctgtactccggacccggacccgaatacgacgat
cccgccaactgcgcacccgaagaggatcagtacggctcccagtacggaggaccctatgga
cagccctatgatcactacggttcccggggatccatgggacgtcgtagcatcggctctgct
cgcaatcctggcaatggatcacccgagcctccaccaccaccaccacgcaaccacgacatg
agcaactcctcattcaacgactccaaggagagtaatgagatctcagaggcagagtgcgat
cgtgaccacggaccacgcggaaactacggagcagtgaagcgatctccacaaccgaaagat
cagcgcaccaccgaagaaatgcgcaaactgatagaaagaaacgaaaccggcccaaaacaa
ctccaactccaacaagcaaatggcgcaggattcacagcctacgatactatggcagtgtaa