IMGT Repertoire (RPI)
IMGT reference sequences in FASTA format:
Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>M12807|CD4*01|Homo sapiens|F|EX1| atgaaccggggagtcccttttaggcacttgcttctggtgctgcaactgg >M12807|CD4*01|Homo sapiens|F|EX2|[D1]|V-LIKE| cgctcctcccagcagccactcagggaaagaaagtggtgctgggcaaaaaaggggatacag tggaactgacctgtacagcttcccagaagaag..................agcatacaat tccactggaaaaactcc............aaccagataaagattctgggaaatcagggc. ...........tccttcttaactaaag >M12807|CD4*01|Homo sapiens|F|EX3|[D1]|V-LIKE| gtccatccaagctgaatgatcgcgctgactcaagaagaagcctttgggaccaaggaaact tccccctgatcatcaagaatcttaagatagaagactcagatacttacatctgtgaagtgg ag........................gaccagaaggaggaggtgcaattgctagtgttcg gat >M12807|CD4*01|Homo sapiens|F|EX4|[D2]|C-LIKE| tgactgccaactctgacacccacctgcttcaggggcagagcctgaccctgaccttggaga gcccccct.........ggtagtagcccctcagtgcaatgtaggagtccaagg....... ....................ggtaaaaacatacaggggggg................... ............................................................ ..............aagaccctctccgtgtctcagctggagctc......caggatagtg gcacctggacatgcactgtcttgcagaac.........cagaagaaggtggagttcaaaa tagacatcgtggtgctag >M12807|CD4*01|Homo sapiens|F|EX5|[D3]|V-LIKE| .......ctttccagaaggcctccagcatagtctataagaaagagggggaacaggtggag ttctccttcccactcgcctttacagttgaaaag......ctgacgggcagtggcgagctg tggtggcaggcggagagggcttcctcctccaagtcttggatcacctttgacctgaagaac aaggaagtgtctgtaaaacgggttacccaggac...............cctaagctccag atgggcaagaagctcccgctccacctcaccctgccccaggccttgcctcagtatgctggc tctggaaacctcaccctggcccttgaagcg......aaaacaggaaagttgcatcaggaa gtgaacctggtggtgatgagag >M12807|CD4*01|Homo sapiens|F|EX6|[D4]|C-LIKE| ..................ccactcag...ctccag......................... ..aaaaatttgacctgtgaggtgtggggacccacc............tcccctaagctga tgctgagcttgaaactggagaac...............aaggaggcaaaggtctcgaagc gggag....................................aaggcggtgtgggtgctga accctgaggcg........................gggatgtggcagtgtctgctgagtg actcg............ggacaggtcctgctggaatccaacatcaagg >M12807|CD4*01|Homo sapiens|F|EX7| ttctgcccacatggtccaccccggtgcagccaatggccctgattgtgctggggggcgtcg ccggcctcctgcttttcattgggctaggcatcttcttctgtgtcaggtgccggcaccgaa gg >M12807|CD4*01|Homo sapiens|F|EX8| cgccaagcagagcggatgtctcagatcaagagactcctcagtgagaagaagacctgccag tgccctca >M12807|CD4*01|Homo sapiens|F|EX9| ccggtttcagaagacatgtagccccatttga >M35160|CD4*02|Homo sapiens|F|EX1| atgaaccggggagtcccttttaggcacttgcttctggtgctgcaactgg >M35160|CD4*02|Homo sapiens|F|EX2|[D1]|V-LIKE| cgctcctcccagcagccactcagggaaagaaagtggtgctgggcaaaaaaggggatacag tggaactgacctgtacagcttcccagaagaag..................agcatacaat tccactggaaaaactcc............aaccagataaagattctgggaaatcagggc. ...........tccttcttaactaaag >M35160|CD4*02|Homo sapiens|F|EX3|[D1]|V-LIKE| gtccatccaagctgaatgatcgcgctgactcaagaagaagcctttgggaccaaggaaact tccccctgatcatcaagaatcttaagatagaagactcagatacttacatctgtgaagtgg ag........................gaccagaaggaggaggtgcaattgctagtgttcg gat >M35160|CD4*02|Homo sapiens|F|EX4|[D2]|C-LIKE| tgactgccaactctgacacccacctgcttcaggggcagagcctgaccctgaccttggaga gcccccct.........ggtagtagcccctcagtgcaatgtaggagtccaagg....... ....................ggtaaaaacatacaggggggg................... ............................................................ ..............aagaccctctccgtgtctcagctggagctc......caggatagtg gcacctggacatgcactgtcttgcagaac.........cagaagaaggtggagttcaaaa tagacatcgtggtgctag >M35160|CD4*02|Homo sapiens|F|EX5|[D3]|V-LIKE| .......ctttccagaaggcctccagcatagtctataagaaagagggggaacaggtggag ttctccttcccactcgcctttacagttgaaaag......ctgacgggcagtggcgagctg tggtggcaggcggagagggcttcctcctccaagtcttggatcacctttgacctgaagaac aaggaagtgtctgtaaaacgggttacccaggac...............cctaagctccag atgggcaagaagctcccgctccacctcaccctgccccaggccttgcctcagtatgctggc tctggaaacctcaccctggcccttgaagcg......aaaacaggaaagttgcatcaggaa gtgaacctggtggtgatgagag >M35160|CD4*02|Homo sapiens|F|EX6|[D4]|C-LIKE| ..................ccactcag...ctccag......................... ..aaaaatttgacctgtgaggtgtggggacccacc............tcccctaagctga tgctgagcttgaaactggagaac...............aaggaggcaaaggtctcgaagc gggag....................................aaggcggtgtgggtgctga accctgaggcg........................gggatgtggcagtgtctgctgagtg actcg............ggacaggtcctgctggaatccaacatcaagg >M35160|CD4*02|Homo sapiens|F|EX7| ttctgcccacatggtccaccccggtgcagccaatggccctgattgtgctggggggcgtcg ccggcctcctgcttttcattgggctaggcatcttcttctgtgtcaggtgccggcaccgaa gg >M35160|CD4*02|Homo sapiens|F|EX8| cgccaagcagagcggatgtctcagatcaagagactcctcagtgagaagaagacctgccag tgccctca >M35160|CD4*02|Homo sapiens|F|EX9| ccggtttcagaagacatgtagccccatttga >U40625|CD4*03|Homo sapiens|F|EX4|[D2]|C-LIKE|partial| ctgccaactctgacacccacctgcttcaggggcagagcctgaccctgaccttggagagcc cccct.........ggtagtagcccctcagtgcaatgtaggagtccaagg.......... .................ggtaaaaacatacaggggggg...................... ............................................................ ...........aagaccctctccgtgtctcagctggagctc......caggatagtggca cctggacatgcactgtcttgcagaac.........cagaagaaggtggagttcaaaatag acatcgtggtgctag >U40625|CD4*03|Homo sapiens|F|EX5|[D3]|V-LIKE|partial| ctttcc >DQ012936|CD4*04|Homo sapiens|F|EX1| atgaaccggggagtcccttttaggcacttgcttctggtgctgcaactgg >DQ012936|CD4*04|Homo sapiens|F|EX2|[D1]|V-LIKE| cgctcctcccagcagccactcagggaaagaaagtggtgctgggcaaaaaaggggatacag tggaactgacctgtacagcttcccagaagaag..................agcatacaat tccactggaaaaactcc............aaccagataaagattctgggaaatcagggc. ...........tccttcttaactaaag >DQ012936|CD4*04|Homo sapiens|F|EX3|[D1]|V-LIKE| gtccatccaagctgaatgatcgcgctgactcaagaagaagcctttgggaccaaggaaact ttcccctgatcatcaagaatcttaagatagaagactcagatacttacatctgtgaagtgg ag........................gaccagaaggaggaggtgcaattgctagtgttcg gat >DQ012936|CD4*04|Homo sapiens|F|EX4|[D2]|C-LIKE| tgactgccaactctgacacccacctgcttcaggggcagagcctgaccctgaccttggaga gcccccct.........ggtagtagcccctcagtgcaatgtaggagtccaagg....... ....................ggtaaaaacatacaggggggg................... ............................................................ ..............aagaccctctccgtgtctcagctggagctc......caggatagtg gcacctggacatgcactgtcttgcagaac.........cagaagaaggtggagttcaaaa tagacatcgtggtgctag >DQ012936|CD4*04|Homo sapiens|F|EX5|[D3]|V-LIKE| .......ctttccagaaggcctccagcatagtctataagaaagagggggaacaggtggag ttctccttcccactcgcctttacagttgaaaag......ctgacgggcagtggcgagctg tggtggcaggcggagagggcttcctcctccaagtcttggatcacctttgacctgaagaac aaggaagtgtctgtaaaacgggttacccaggac...............cctaagctccag atgggcaagaagctcccgctccacctcaccctgccccaggccttgcctcagtatgctggc tctggaaacctcaccctggcccttgaagcg......aaaacaggaaagttgcatcaggaa gtgaacctggtggtgatgagag >DQ012936|CD4*04|Homo sapiens|F|EX6|[D4]|C-LIKE| ..................ccactcag...ctccag......................... ..aaaaatttgacctgtgaggtgtggggacccacc............tcccctaagctga tgctgagcttgaaactggagaac...............aaggaggcaaaggtctcgaagc gggag....................................aaggcggtgtgggtgctga accctgaggcg........................gggatgtggcagtgtctgctgagtg actcg............ggacaggtcctgctggaatccaacatcaagg >DQ012936|CD4*04|Homo sapiens|F|EX7| ttctgcccacatggtccaccccggtgcagccaatggccctgattgtgctggggggcgtcg ccggcctcctgcttttcattgggctaggcatcttcttctgtgtcaggtgccggcaccgaa gg >DQ012936|CD4*04|Homo sapiens|F|EX8| cgccaagcagagcggatgtctcagatcaagagactcctcagtgagaagaagacctgccag tgccctca >DQ012936|CD4*04|Homo sapiens|F|EX9| ccggtttcagaagacatgtagccccatttga >U47924|CD4*05|Homo sapiens|F|EX1| atgaaccggggagtcccttttaggcacttgcttctggtgctgcaactgg >U47924|CD4*05|Homo sapiens|F|EX2|[D1]|V-LIKE| cgctcctcccagcagccactcagggaaagaaagtggtgctgggcaaaaaaggggatacag tggaactgacctgtacagcttcccagaagaag..................agcatacaat tccactggaaaaactcc............aaccagataaagattctgggaaatcagggc. ...........tccttcttaactaaag >U47924|CD4*05|Homo sapiens|F|EX3|[D1]|V-LIKE| gtccatccaagctgaatgatcgcgctgactcaagaagaagcctttgggaccaaggaaact ttcccctgatcatcaagaatcttaagatagaagactcagatacttacatctgtgaagtgg ag........................gaccagaaggaggaggtgcaattgctagtgttcg gat >U47924|CD4*05|Homo sapiens|F|EX4|[D2]|C-LIKE| tgactgccaactctgacacccacctgcttcaggggcagagcctgaccctgaccttggaga gcccccct.........ggtagtagcccctcagtgcaatgtaggagtccaagg....... ....................ggtaaaaacatacaggggggg................... ............................................................ ..............aagaccctctccgtgtctcagctggagctc......caggatagtg gcacctggacatgcactgtcttgcagaac.........cagaagaaggtggagttcaaaa tagacatcgtggtgctag >U47924|CD4*05|Homo sapiens|F|EX5|[D3]|V-LIKE| .......ctttccagaaggcctccagcatagtctataagaaagagggggaacaggtggag ttctccttcccactcgcctttacagttgaaaag......ctgacgggcagtggcgagctg tggtggcaggcggagagggcttcctcctccaagtcttggatcacctttgacctgaagaac aaggaagtgtctgtaaaacgggttacccaggac...............cctaagctccag atgggcaagaagctcccgctccacctcaccctgccccaggccttgcctcagtatgctggc tctggaaacctcaccctggcccttgaagcg......aaaacaggaaagttgcatcaggaa gtgaacctggtggtgatgagag >U47924|CD4*05|Homo sapiens|F|EX6|[D4]|C-LIKE| ..................ccactcag...ctccag......................... ..aaaaatttgacctgtgaggtgtggggacccacc............tcccctaagctga tgctgagtttgaaactggagaac...............aaggaggcaaaggtctcgaagc gggag....................................aaggcggtgtgggtgctga accctgaggcg........................gggatgtggcagtgtctgctgagtg actcg............ggacaggtcctgctggaatccaacatcaagg >U47924|CD4*05|Homo sapiens|F|EX7| ttctgcccacatggtccaccccggtgcagccaatggccctgattgtgctggggggcgtcg ccggcctcctgcttttcattgggctaggcatcttcttctgtgtcaggtgccggcaccgaa gg >U47924|CD4*05|Homo sapiens|F|EX8| cgccaagcagagcggatgtctcagatcaagagactcctcagtgagaagaagacctgccag tgtcctca >U47924|CD4*05|Homo sapiens|F|EX9| ccggtttcagaagacatgtagccccatttga
Created: 23/05/2007
Last updated: Friday, 22-Sep-2023 18:32:07 CEST
Author: Phani Vijay Garapati and Marie-Paule Lefranc
Editor: Chantal Ginestoux
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