IMGT Repertoire (RPI)
IMGT reference sequences in FASTA format:
Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>J03858|CEACAM1*01|Homo sapiens|F|EX1| atggggcacctctcagccccacttcacagagtgcgtgtaccctggcaggggcttctgctc acag >J03858|CEACAM1*01|Homo sapiens|F|EX2|[D1]|V-LIKE| cctcacttctaaccttctggaacccgcccaccactgcccagctcactactgaatccatgc cattcaatgttgcagaggggaaggaggttcttctccttgtccacaatctgccccagcaa. .................ctttttggctacagctggtacaaaggggaaagagtggatggca accgtcaaattgtaggatatgcaatagga.........actcaacaagctaccccagggc ccgcaaac...agcggtcgagagacaatatac......ccc......aatgcatccctgc tgatccagaacgtcacccagaatgacacaggattctacaccctacaagtcataaagtca. ........gatcttgtgaatgaagaagcaactggacagttccatgtatacc >J03858|CEACAM1*01|Homo sapiens|F|EX3|[D2]|C-LIKE| ........................cggagctgcccaagccctccatctccagcaacaact ccaaccctgtggaggacaaggatgctgtggccttcacctgtgaacctgagactcaggac. ..............acaacctacctgtggtggataaacaatcagagcctcccggtc.... ..agtcccaggctgcagctgtccaat.................................. ........ggcaacaggaccctcactctactcagtgtcacaagg......aatgacacag gaccctatgagtgtgaaatacagaaccca............gtgagtgcgaaccgcagtg acccagtcaccttgaatgtcacct >J03858|CEACAM1*01|Homo sapiens|F|EX4|[D3]|C-LIKE| ..................atggcccggacacccccaccatttccccttcagacacctatt accgtcca.........ggggcaaacctcagcctctcctgctatgcagcctctaaccca. ...........cctgcacagtactcctggcttatcaatgga................... ..acattccagcaaagcaca........................................ ..............caagagctctttatccctaacatcactgtg......aataatagtg gatcctatacctgccacgccaataactca.........gtcactggctgcaacaggacca cagtcaagacgatcatagtcactg >J03858|CEACAM1*01|Homo sapiens|F|EX5|[D4]|C-LIKE| ...............agctaagtccagtagtagcaaagccccaaatcaaagccagcaaga ccacagtcacaggagataaggactctgtgaacctgacctgctccacaaatgacactgga. ..............atctccatccgttggttcttcaaaaaccagagtctcccgtcc.... ..tcggagaggatgaagctgtcccag.................................. ........ggcaacaccaccctcagcataaaccctgtcaagagg......gaggatgctg ggacgtattggtgtgaggtcttcaaccca............atcagtaagaaccaaagcg accccatcatgctgaacgtaaact >J03858|CEACAM1*01|Homo sapiens|F|EX7| ataatgctctaccacaagaaaatggcctctcacctggggccattgctggcattgtgattg gagtagtggccctggttgctctgatagcagtagccctggcatgttttctgcatttcggga agaccggcag >J03858|CEACAM1*01|Homo sapiens|F|EX8| ggcaagcgaccagcgtgatctcacagagcacaaaccctcagtctccaaccaca >J03858|CEACAM1*01|Homo sapiens|F|EX9| ctcaggaccactccaatgacccacctaacaag >J03858|CEACAM1*01|Homo sapiens|F|EX10| atgaatgaagttacttattctaccctgaactttgaagcccagcaacccacacaaccaact tcagcctccccatccctaacagccacagaaataatttattcagaagtaaaaaagcagtaa >D12502|CEACAM1*02|Homo sapiens|F|EX1| atggggcacctctcagccccacttcacagagtgcgtgtaccctggcaggggcttctgctc acag >D12502|CEACAM1*02|Homo sapiens|F|EX2|[D1]|V-LIKE| cctcacttctaaccttctggaacccgcccaccactgcccagctcactactgaatccatgc cattcaatgttgcagaggggaaggaggttcttctccttgtccacaatctgccccagcaa. .................ctttttggctacagctggtacaaaggggaaagagtggatggca accgtcaaattgtaggatatgcaatagga.........actcaacaagctaccccagggc ccgcaaac...agcggtcgagagacaatatac......ccc......aatgcatccctgc tgatccagaacgtcacccagaatgacacaggattctacaccctacaagtcataaagtca. ........gatcttgtgaatgaagaagcaactggacagttccatgtatacc >D12502|CEACAM1*02|Homo sapiens|F|EX3|[D2]|C-LIKE| ........................cggagctgcccaagccctccatctccagcaacaact ccaaccctgtggaggacaaggatgctgtggccttcacctgtgaacctgagactcaggac. ..............acaacctacctgtggtggataaacaatcagagcctcccggtc.... ..agtcccaggctgcagctgtccaat.................................. ........ggcaacaggaccctcactctactcagtgtcacaagg......aatgacacag gaccctatgagtgtgaaatacagaaccca............gtgagtgcgaaccgcagtg acccagtcaccttgaatgtcacct >D12502|CEACAM1*02|Homo sapiens|F|EX4|[D3]|C-LIKE| ..................atggcccggacacccccaccatttccccttcatacacctatt accgtcca.........ggggcaaacctcagcctctcctgctatgcagcctctaaccca. ...........cctgcacagtactcctggcttatcaatgga................... ..acattccagcaaagcaca........................................ ..............caagagctctttatccctaacatcactgtg......aataatagtg gatcctatacctgccacgccaataactca.........gtcactggctgcaacaggacca cagtcaagacgatcatagtcactg >D12502|CEACAM1*02|Homo sapiens|F|EX6| agagacagaatctcaccatgttgcccgggctggactcgaactcctgggctcaagcaatcc tcccatctgtttcccaaagtgctgagattacag >D12502|CEACAM1*02|Homo sapiens|F|EX7| ataatgctctaccacaagaaaatggcctctcacctggggccattgctggcattgtgattg gagtagtggccctggttgctctgatagcagtagccctggcatgttttctgcatttcggga agaccggcag >D12502|CEACAM1*02|Homo sapiens|F|EX8| ggcaagcgaccagcgtgatctcacagagcacaaaccctcagtgtccaaccaca >D12502|CEACAM1*02|Homo sapiens|F|EX9| ctcaggaccactccaatgacccacctaacaag >D12502|CEACAM1*02|Homo sapiens|F|EX10| atgaatgaagttacttattctaccctgaactttgaagcccagcaacccacacaaccaact tcagcctccccatccctaacagccacagaaataatttattcagaagtaaaaaagcagtaa
Created: 27/07/2006
Last updated: Friday, 22-Sep-2023 18:32:07 CEST
Author: Stéphanie Douvres, Phani Vijay Garapati, Marie-Paule Lefranc
Editor: Chantal Ginestoux
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