IMGT Repertoire (RPI)
IMGT reference sequences in FASTA format:
Nucleotide sequences with gaps
The FASTA header contains:
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
IMGT accession number | gene and allele name | species | functionality | exon name | domain name | domain type | alternative splicing (if it is) | partial (if it is)
>M73255|VCAM1*01|Homo sapiens|F|EX1|643..706 atgcctgggaagatggtcgtgatccttggagcctcaaatatactttggataatgtttgca gctt >M73255|VCAM1*01|Homo sapiens|F|EX2|[D1]|C-LIKE|779..1054 ..................ctcaagcttttaaaatcgagaccaccccagaatctagatatc ttgctcagatt......ggtgactccgtctcattgacttgcagcaccacaggctgtgag. ...........tccccatttttctcttggagaacccagatagatagtccactg....... ..aatgggaaggtgacgaatgagggg.................................. ........accacatctacgctgacaatgaatcctgttagtttt......gggaacgaac actcttacctgtgcacagcaacttgtgaa............tctaggaaattggaaaaag gaatccaggtggagatctact >M73255|VCAM1*01|Homo sapiens|F|EX3|[D2]|C-LIKE|1127..1447 ..................cttttcctaaggatccagagattcatttgagt...ggccctc tggaggct.........gggaagccgatcacagtcaagtgttcagttgctgatgtatacc cattt........................gacaggctggagatagacttactgaaagga. ..gatcatctcatgaagagtcaggaatttctggaggatgcagac......aggaagtccc tggaaaccaagagtttggaagtaacctttactcctgtcattgag......gatattggaa aagttcttgtttgccgagctaaattacacattgatgaaatggattctgtgcccacagtaa ggcaggctgtaaaagaattgcaagtctaca >M73255|VCAM1*01|Homo sapiens|F|EX4|[D3]|C-LIKE|1520..1786 ..................tatcacccaagaatacagttatttctgtgaatccatccacaa agctgcaagaa......ggtggctctgtgaccatgacctgttccagcgagggtctacca. ...........gctccagagattttctggagtaagaaattagat................ ..aatgggaatctacagcacctttct..................ggaaatgcaactctca ccttaattgctatgaggatg........................................ ..gaagattctggaatttatgtgtgtgaaggagttaatttg............attggga aaaacagaaaagaggtggaattaattgttcaag >M73255|VCAM1*01|Homo sapiens|F|EX5|[D4]|C-LIKE|1859..2134 ..................agaaaccatttactgttgagatctcccctggaccccggattg ctgctcagatt......ggagactcagtcatgttgacatgtagtgtcatgggctgtgaa. ...........tccccatctttctcctggagaacccagatagacagccctctg....... ..agcgggaaggtgaggagtgagggg.................................. ........accaattccacgctgaccctgagccctgtgagtttt......gagaacgaac actcttatctgtgcacagtgacttgtgga............cataagaaactggaaaagg gaatccaggtggagctctact >M73255|VCAM1*01|Homo sapiens|F|EX6|[D5]|C-LIKE|2207..2527 ..................cattccctagagatccagaaatcgagatgagt...ggtggcc tcgtgaat.........gggagctctgtcactgtaagctgcaaggttcctagcgtgtacc ccctt...gaccggctggagattgaattacttaagggg...................... ..gagactattctggagaatatagagtttttggaggatacggat......atgaaatctc tagagaacaaaagtttggaaatgaccttcatccctaccattgaa......gatactggaa aagctcttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaa ggcagagtacgcaaacactttatgtcaatg >M73255|VCAM1*01|Homo sapiens|F|EX7|[D6]|C-LIKE|2897..3163 ..................ttgcccccagagatacaaccgtcttggtcagcccttcctcca tcctggaggaa......ggcagttctgtgaatatgacatgcttgagccagggctttcct. ...........gctccgaaaatcctgtggagcaggcagctccct................ ..aacggggagctacagcctctttct.................................. ........gagaatgcaactctcaccttaatttctacaaaaatg......gaagattctg gggtttatttatgtgaaggaattaaccag............gctggaagaagcagaaagg aagtggaattaattatccaag >M73255|VCAM1*01|Homo sapiens|F|EX8|[D7]|C-LIKE|3236..3502 ..................ttactccaaaagacataaaacttacagcttttccttctgaga gtgtcaaagaa......ggagacactgtcatcatctcttgtacatgtggaaatgtt.... .................ccagaaacatggataatcctgaagaaaaaa............. .....gcggagacaggagacacagtactaaaa............................ .....tctatagatggcgcctataccatccgaaaggcccagttg......aaggatgcgg gagtatatgaatgtgaatctaaaaacaaa............gttggctcacaattaagaa gtttaacacttgatgttcaag >M73255|VCAM1*01|Homo sapiens|F|EX9| |CO+TM+CY|3922..4082 gaagagaaaacaacaaagactatttttctcctgagcttctcgtgctctattttgcatcct ccttaataatacctgccattggaatgataatttactttgcaagaaaagccaacatgaagg ggtcatatagtcttgtagaagcacagaaatcaaaagtgtag >M30257|VCAM1*01|Homo sapiens|F|EX1|splicing B|107..170 atgcctgggaagatggtcgtgatccttggagcctcaaatatactttggataatgtttgca gctt >M30257|VCAM1*01|Homo sapiens|F|EX2|[D1]|C-LIKE|splicing B|171..446 ..................ctcaagcttttaaaatcgagaccaccccagaatctagatatc ttgctcagatt......ggtgactccgtctcattgacttgcagcaccacaggctgtgag. ...........tccccatttttctcttggagaacccagatagatagtccactg....... ..aatgggaaggtgacgaatgagggg.................................. ........accacatctacgctgacaatgaatcctgttagtttt......gggaacgaac actcttacctgtgcacagcaacttgtgaa............tctaggaaattggaaaaag gaatccaggtggagatctact >M30257|VCAM1*01|Homo sapiens|F|EX3|[D2]|C-LIKE|splicing B|447..767 ..................cttttcctaaggatccagagattcatttgagt...ggccctc tggaggct.........gggaagccgatcacagtcaagtgttcagttgctgatgtatacc cattt........................gacaggctggagatagacttactgaaagga. ..gatcatctcatgaagagtcaggaatttctggaggatgcagac......aggaagtccc tggaaaccaagagtttggaagtaacctttactcctgtcattgag......gatattggaa aagttcttgtttgccgagctaaattacacattgatgaaatggattctgtgcccacagtaa ggcaggctgtaaaagaattgcaagtctaca >M30257|VCAM1*01|Homo sapiens|F|EX4|[D3]|C-LIKE|splicing B|768..1034 ..................tatcacccaagaatacagttatttctgtgaatccatccacaa agctgcaagaa......ggtggctctgtgaccatgacctgttccagcgagggtctacca. ...........gctccagagattttctggagtaagaaattagat................ ..aatgggaatctacagcacctttct..................ggaaatgcaactctca ccttaattgctatgaggatg........................................ ..gaagattctggaatttatgtgtgtgaaggagttaatttg............attggga aaaacagaaaagaggtggaattaattgttcaag >M30257|VCAM1*01|Homo sapiens|F|EX6|[D5]|C-LIKE|splicing B|1035..1355 ..................cattccctagagatccagaaatcgagatgagt...ggtggcc tcgtgaat.........gggagctctgtcactgtaagctgcaaggttcctagcgtgtacc ccctt...gaccggctggagattgaattacttaagggg...................... ..gagactattctggagaatatagagtttttggaggatacggat......atgaaatctc tagagaacaaaagtttggaaatgaccttcatccctaccattgaa......gatactggaa aagctcttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaa ggcagagtacgcaaacactttatgtcaatg >M30257|VCAM1*01|Homo sapiens|F|EX7|[D6]|C-LIKE|splicing B|1356..1622 ..................ttgcccccagagatacaaccgtcttggtcagcccttcctcca tcctggaggaa......ggcagttctgtgaatatgacatgcttgagccagggctttcct. ...........gctccgaaaatcctgtggagcaggcagctccct................ ..aacggggagctacagcctctttct.................................. ........gagaatgcaactctcaccttaatttctacaaaaatg......gaagattctg gggtttatttatgtgaaggaattaaccag............gctggaagaagcagaaagg aagtggaattaattatccaag >M30257|VCAM1*01|Homo sapiens|F|EX8|[D7]|C-LIKE|splicing B|1623..1889 ..................ttactccaaaagacataaaacttacagcttttccttctgaga gtgtcaaagaa......ggagacactgtcatcatctcttgtacatgtggaaatgtt.... .................ccagaaacatggataatcctgaagaaaaaa............. .....gcggagacaggagacacagtactaaaa............................ .....tctatagatggcgcctataccatccgaaaggcccagttg......aaggatgcgg gagtatatgaatgtgaatctaaaaacaaa............gttggctcacaattaagaa gtttaacacttgatgttcaag >M30257|VCAM1*01|Homo sapiens|F|EX9| |CO+TM+CY|splicing B|1890..2050 gaagagaaaacaacaaagactatttttctcctgagcttctcgtgctctattttgcatcct ccttaataatacctgccattggaatgataatttactttgcaagaaaagccaacatgaagg ggtcatatagtcttgtagaagcacagaaatcaaaagtgtag >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX1|121..184 atgcctgggaagatggtcgtgatccttggagcctcaaatatactttggataatgtttgca gctt >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX2|[D1]|C-LIKE|736..1011 ..................ctcaagcttttaaaatcgagaccaccccagaatctagatatc ttgctcagatt......ggtgactccgtctcattgacttgcagcaccacaggctgtgag. ...........tccccatttttctcttggagaacccagatagatagtccactg....... ..aatgggaaggtgacgaatgagggg.................................. ........accacatctacgctgacaatgaatcctgttagtttt......gggaacgaac actcttacctgtgcacagcaacttgtgaa............tctaggaaattggaaaaag gaatccaggtggagatctact >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX3|[D2]|C-LIKE|3280..3600 ..................cttttcctaaggatccagagattcatttgagt...ggccctc tggaggct.........gggaagccgatcacagtcaagtgttcagttgctgatgtatacc cattt........................gacaggctggagatagacttactgaaagga. ..gatcatctcatgaagagtcaggaatttctggaggatgcagac......aggaagtccc tggaaaccaagagtttggaagtaacctttactcctgtcattgag......gatattggaa aagttcttgtttgccgagctaaattacacattgatgaaatggattctgtgcccacagtaa ggcaggctgtaaaagaattgcaagtctaca >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX4|[D3]|C-LIKE|4884..5150 ..................tatcacccaagaatacagttatttctgtgaatccatccacaa agctgcaagaa......ggtggctctgtgaccatgacctgttccagcgagggtctacca. ...........gctccagagattttctggagtaagaaattagat................ ..aatgggaatctacagcacctttct..................ggaaatgcaactctca ccttaattgctatgaggatg........................................ ..gaagattctggaatttatgtgtgtgaaggagttaatttg............attggga aaaacagaaaagaggtggaattaattgttcaag >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX5|[D4]|C-LIKE|9367..9642 ..................agaaaccatttactgttgagatctcccctggaccccggattg ctgctcagatt......ggagactcagtcatgttgacatgtagtgtcatgggctgtgaa. ...........tccccatctttctcctggagaacccagatagacagccctctg....... ..agcgggaaggtgaggagtgagggg.................................. ........accaattccacgctgaccctgagccctgtgagtttt......gagaacgaac actcttatctgtgcacagtgacttgtgga............cataagaaactggaaaagg gaatccaggtggagctctact >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX6|[D5]|C-LIKE|11458..11778 ..................cattccctagagatccagaaatcgagatgagt...ggtggcc tcgtgaat.........gggagctctgtcactgtaagctgcaaggttcctagcgtgtacc ccctt...gaccggctggagattgaattacttaagggg...................... ..gagactattctggagaatatagagtttttggaggatacggat......atgaaatctc tagagaacaaaagtttggaaatgaccttcatccctaccattgaa......gatactggaa aagctcttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaa ggcagagtacgcaaacactttatgtcaatg >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX7|[D6]|C-LIKE|12678..12944 ..................ttgcccccagagatacaaccgtcttggtcagcccttcctcca tcctggaggaa......ggcagttctgtgaatatgacatgcttgagccagggctttcct. ...........gctccgaaaatcctgtggagcaggcagctccct................ ..aacggggagctacagcctctttct.................................. ........gagaatgcaactctcaccttaatttctacaaaaatg......gaagattctg gggtttatttatgtgaaggaattaaccag............gctggaagaagcagaaagg aagtggaattaattatccaag >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX8|[D7]|C-LIKE|14762..15028 ..................ttactccaaaagacataaaacttacagcttttccttctgaga gtgtcaaagaa......ggagacactgtcatcatctcttgtacatgtggaaatgtt.... .................ccagaaacatggataatcctgaagaaaaaa............. .....gcggagacaggagacacagtactaaaa............................ .....tctatagatggcgcctataccatccgaaaggcccagttg......aaggatgcgg gagtatatgaatgtgaatctaaaaacaaa............gttggctcacaattaagaa gtttaacacttgatgttcaag >AC093428 (3686..22990)|VCAM1*02|Homo sapiens|F|EX9| |CO+TM+CY|18383..18543 gaagagaaaacaacaaagactatttttctcctgagcttctcgtgctctattttgcatcct ccttaataatacctgccattggaatgataatttactttgcaagaaaagccaacatgaagg ggtcatatagtcttgtagaagcacagaagtcaaaagtgtag >CR603251|VCAM1*02|Homo sapiens|F|EX6|[D5]|C-LIKE|1..321 ..................cattccctagagatccagaaatcgagatgagt...ggtggcc tcgtgaat.........gggagctctgtcactgtaagctgcaaggttcctagcgtgtacc ccctt...gaccggctggagattgaattacttaagggg...................... ..gagactattctggagaatatagagtttttggaggatacggat......atgaaatctc tagagaacaaaagtttggaaatgaccttcatccctaccattgaa......gatactggaa aagctcttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaa ggcagagtacgcaaacactttatgtcaatg >CR603251|VCAM1*02|Homo sapiens|F|EX7|[D6]|C-LIKE|322..588 ..................ttgcccccagagatacaaccgtcttggtcagcccttcctcca tcctggaggaa......ggcagttctgtgaatatgacatgcttgagccagggctttcct. ...........gctccgaaaatcctgtggagcaggcagctccct................ ..aacggggagctacagcctctttct.................................. ........gagaatgcaactctcaccttaatttctacaaaaatg......gaagattctg gggtttatttatgtgaaggaattaaccag............gctggaagaagcagaaagg aagtggaattaattatccaag >CR603251|VCAM1*02|Homo sapiens|F|EX8|[D7]|C-LIKE|589..855 ..................ttactccaaaagacataaaacttacagcttttccttctgaga gtgtcaaagaa......ggagacactgtcatcatctcttgtacatgtggaaatgtt.... .................ccagaaacatggataatcctgaagaaaaaa............. .....gcggagacaggagacacagtactaaaa............................ .....tctatagatggcgcctataccatccgaaaggcccagttg......aaggatgcgg gagtatatgaatgtgaatctaaaaacaaa............gttggctcacaattaagaa gtttaacacttgatgttcaag >CR603251|VCAM1*02|Homo sapiens|F|EX9| |CO+TM+CY|856..1016 gaagagaaaacaacaaagactatttttctcctgagcttctcgtgctctattttgcatcct ccttaataatacctgccattggaatgataatttactttgcaagaaaagccaacatgaagg ggtcatatagtcttgtagaagcacagaagtcaaaagtgtag >AK223266|VCAM1*03|Homo sapiens|F|EX1|121..184 atgcctgggaagatggtcgtgatccttggagcctcaaatatactttggataatgtttgca gctt >AK223266|VCAM1*03|Homo sapiens|F|EX2|[D1]|C-LIKE|185..460 ..................ctcaagcttttaaaatcgagaccaccccagaatctagatatc ttgctcagatt......ggtgactccgtctcattgacttgcagcaccacaggctgtgag. ...........tccccatttttctcttggagaacccagatagatagtccactg....... ..aatgggaaggtgacgaatgagggg.................................. ........accacatctacgctgacaatgaatcctgttagtttt......gggaacgaac actcttacctgtgcacagcaacttgtgaa............tctaggaaattggaaaaag gaatccaggtggagatctact >AK223266|VCAM1*03|Homo sapiens|F|EX3|[D2]|C-LIKE|461..781 ..................cttttcctaaggatccagagattcatttgagt...ggccctc tggaggct.........gggaagccgatcacagtcaagtgttcagttgctgatgtatacc cattt........................gacaggctggagatagacttactgaaagga. ..gatcatctcatgaagagtcaggaatttctggaggatgcagac......aggaagtccc tggaaaccaagagtttggaagtaacctttactcctgtcattgag......gatattggaa aagttcttgtttgccgagctaaattacacattgatgaaatggattctgtgcccacagtaa ggcaggctgtaaaagaattgcaagtctaca >AK223266|VCAM1*03|Homo sapiens|F|EX4|[D3]|C-LIKE |782..1028 ..................tatcacccaagaatacagttatttctgtgaatccatccacaa agctgcaagaa......ggtggctctgtgaccatgacctgttccagcgagggtctacca. ...........gctccagagattttctggagtaagaaattagat................ ..aatgggaatctacagcacctttct..................ggaaatgcaactctca ccttaattgctatgaggatg........................................ ..gaagattctggaatttatgtgtgtgaaggagttaatttg............attggga aaaacagaaaagaggtggaattaattgttcaag >AK223266|VCAM1*03|Homo sapiens|F|EX5|[D4]|C-LIKE|1029..1324 ..................agaaaccatttactgttgagatctcccctggaccccggattg ctgctcagact......ggagactcagtcatgttgacatgtagtgtcatgggctgtgaa. ...........tccccatctttctcctggagaacccagatagacagccctctg....... ..agcgggaaggtgaggagtgagggg.................................. ........accaattccacgctgaccctgagccctgtgagtttt......gagaacgaac actcttatctgtgcacagtgacttgtgga............cataagaaactggaaaagg gaatccaggtggagctctact >AK223266|VCAM1*03|Homo sapiens|F|EX6|[D5]|C-LIKE|1325..1645 ..................cattccctagagatccagaaatcgagatgagt...ggtggcc tcgtgaat.........gggagctctgtcactgtaagctgcaaggttcctagcgtgtacc ccctt...gaccggctggagattgaattacttaagggg...................... ..gagactattctggagaatatagagtttttggaggatacggat......atgaaatctc tagagaacaaaagtttggaaatgaccttcatccctaccattgaa......gatactggaa aagctcttgtttgtcaggctaagttacatattgatgacatggaattcgaacccaaacaaa ggcagagtacgcaaacactttatgtcaatg >AK223266|VCAM1*03|Homo sapiens|F|EX7|[D6]|C-LIKE|1646..1912 ..................ttgcccccagagatacaaccgtcttggtcagcccttcctcca tcctggaggaa......ggcagttctgtgaatatgacatgcttgagccagggctttcct. ...........gctccgaaaatcctgtggagcaggcagctccct................ ..aacggggagctacagcctctttct.................................. ........gagaatgcaactctcaccttaatttctacaaaaatg......gaagattctg gggtttatttatgtgaaggaattaaccag............gctggaagaagcagaaagg aagtggaattaattatccaag >AK223266|VCAM1*03|Homo sapiens|F|EX8|[D7]|C-LIKE|1913..2179 ..................ttactccaaaagacataaaacttacagcttttccttctgaga gtgtcaaagaa......ggagacactgtcatcatctcttgtacatgtggaaatgtt.... .................ccagaaacatggataatcctgaagaaaaaa............. .....gcggagacaggagacacagtactaaaa............................ .....tctatagatggcgcctataccatccgaaaggcccagttg......aaggatgcgg gagtatatgaatgtgaatctaaaaacaaa............gttggctcacaattaagaa gtttaacacttgatgttcaag >AK223266|VCAM1*03|Homo sapiens|F|EX9| |CO+TM+CY|2180..2340 gaagagaaaacaacaaagactatttttctcctgagcttctcgtgctctattttgcatcct ccttaataatacctgccattggaatgataatttactttgcaagaaaagccaacatgaagg ggtcatatagtcttgtagaagcacagaaatcaaaagtgtag
Created: 20/02/2007
Last updated: Friday, 22-Sep-2023 18:32:07 CEST
Author: Nelly Rozas, Phani Vijay Garapati and Marie-Paule Lefranc
Editor: Chantal Ginestoux
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