IMGT Repertoire (IG and TR)
Locus in genome assembly: Bornean orangutan (Pongo pygmaeus) IGH locus
Bornean orangutan (Pongo pygmaeus) IGH locus
| IMGT locus | IGH locus | IGH locus | |
|---|---|---|---|
| IMGT locus ID: Ponpyg_IGH_1 | IMGT locus ID: Ponpyg_IGH_2 | ||
| Taxonomy | Pongo pygmaeus (Bornean orangutan), taxon:9600, isolate: AG05252 | Pongo pygmaeus (Bornean orangutan), taxon:9600, isolate: AG05252 | |
| Genome assembly | NHGRI_mPonPyg2-v2.0_alt | NHGRI_mPonPyg2-v2.1_pri | |
| GenBank assembly ID | GCA_028885525.2 | GCA_028885625.3 | |
| RefSeq assembly ID | GCF_028885625.2 | ||
| BAC library | |||
| Chromosome | 15 | 15 | |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM054622.2 (105311893..107057879, complement) | CM054645.2 (104726350..106399170) | |
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_072388.2 (104726350..106399170, complement) | ||
| IMGT locus orientation on the chromosome | REV | REV | |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000229 | IMGT000230 | |
| IMGT/LIGM-DB locus reference sequence length (bp) | 1745987 | 1672821 |
More information:
- Gene table: Bornean orangutan (Pongo pygmaeus) IGHV
- Gene table: Bornean orangutan (Pongo pygmaeus) IGHJ
- Gene table: Bornean orangutan (Pongo pygmaeus) IGHD
- Gene table: Bornean orangutan (Pongo pygmaeus) IGHC
- Potential germline repertoire: Bornean orangutan (Pongo pygmaeus) IGHV, IGHD and IGHJ genes on chromosome 15
- Created:
- 05/12/2023
- Last updated:
- 27/09/2025
- Authors:
- Shamsa Batool
